RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 MAMDC4Q6UXC1 1216 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 C16orf59Q7L2K0 433 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 ARMCX2Q7L311 632 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF8-215ENST00000576958 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 ZNF444Q8N0Y2 327 aaPredicted RBP14.34□□□□□ -0.11
PRPF8-215ENST00000576958 NEDD1Q8NHV4 660 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 MKL1Q969V6 931 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 STARD7Q9NQZ5 370 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 TMEM39AQ9NV64 488 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
PRPF8-215ENST00000576958 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 ZBED4O75132 1171 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 TTLL1O95922 423 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 ASGR1P07306 291 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.12
PRPF8-215ENST00000576958 TSPY3P0CV98 308 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 TSPY8P0CW00 308 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 BMP3P12645 472 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 RAG1P15918 1043 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 TTBK2Q6IQ55 1244 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 ANKRD35Q8N283 1001 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
PRPF8-215ENST00000576958 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
PRPF8-215ENST00000576958 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF8-215ENST00000576958 UMODL1Q5DID0 1318 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 SYNGAP1Q96PV0 1343 aa14.33□□□□□ -0.12
PRPF8-215ENST00000576958 ACRP10323 421 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 PBX2P40425 430 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 USP38Q8NB14 1042 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 GPATCH3Q96I76 525 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRPF8-215ENST00000576958 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 NAPBQ9H115 298 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 CHMP4BQ9H444 224 aaKnown RBP14.32□□□□□ -0.12
PRPF8-215ENST00000576958 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 TBX21Q9UL17 535 aa14.32□□□□□ -0.12
PRPF8-215ENST00000576958 ZFYP08048 801 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-215ENST00000576958 SLC16A2P36021 539 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 FPGSQ05932 587 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 GRIN2CQ14957 1233 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 ANKRD33Q7Z3H0 272 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 FAM227BQ96M60 508 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 CRBNQ96SW2 442 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 UPF3AQ9H1J1 476 aaKnown RBP14.31□□□□□ -0.12
PRPF8-215ENST00000576958 PRDM6Q9NQX0 595 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 RNF146Q9NTX7 359 aa14.31□□□□□ -0.12
PRPF8-215ENST00000576958 REV3LO60673 3130 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 A0A0D9SFI3 127 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 DUSP11O75319 330 aaKnown RBP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 ALAS1P13196 640 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 CSF2RAP15509 400 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 GNAT2P19087 354 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 MX1P20591 662 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 COPB2P35606 906 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 CDK7P50613 346 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 SMAD3P84022 425 aaKnown RBP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 FBXO16Q8IX29 292 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 MAFAQ8NHW3 353 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 STX8Q9UNK0 236 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 CTDP1Q9Y5B0 961 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-215ENST00000576958 GRIN2DO15399 1336 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 TTC41PQ6P2S7 1318 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 CHD7Q9P2D1 2997 aa14.3□□□□□ -0.12
PRPF8-215ENST00000576958 SMPD1P17405 629 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 CYP2C18P33260 490 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 SLC1A4P43007 532 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 GJA9P57773 515 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 PSMC6P62333 389 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 IKQ13123 557 aaPredicted RBP14.29□□□□□ -0.12
PRPF8-215ENST00000576958 GNASQ5JWF2 1037 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 ZNF467Q7Z7K2 595 aaPredicted RBP14.29□□□□□ -0.12
PRPF8-215ENST00000576958 ZNF589Q86UQ0 364 aaPredicted RBP14.29□□□□□ -0.12
PRPF8-215ENST00000576958 FAM126BQ8IXS8 530 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 CHST13Q8NET6 341 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 TRERF1Q96PN7 1200 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 ACAD9Q9H845 621 aa14.29□□□□□ -0.12
PRPF8-215ENST00000576958 FRMPD2Q68DX3 1309 aaPredicted RBP14.29□□□□□ -0.12
PRPF8-215ENST00000576958 TIMP1P01033 207 aa14.28□□□□□ -0.12
PRPF8-215ENST00000576958 DNAJB2P25686 324 aa14.28□□□□□ -0.12
PRPF8-215ENST00000576958 CST5P28325 142 aaPredicted RBP14.28□□□□□ -0.12
PRPF8-215ENST00000576958 STAT2P52630 851 aa14.28□□□□□ -0.12
PRPF8-215ENST00000576958 PDE4BQ07343 736 aa14.28□□□□□ -0.12
PRPF8-215ENST00000576958 TMEM240Q5SV17 173 aa14.28□□□□□ -0.12
PRPF8-215ENST00000576958 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms