RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PAG1Q9NWQ8 432 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 ZBED4O75132 1171 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 BMP1P13497 986 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 PTGS1P23219 599 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 CCL23P55773 120 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 CXCL17Q6UXB2 119 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 ARMCX2Q7L311 632 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 AMOTL1Q8IY63 956 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 KIFC2Q96AC6 838 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 FAM122AQ96E09 287 aa12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-220ENST00000576940 NCOR1O75376 2440 aa12.15□□□□□ -0.47
NPLOC4-220ENST00000576940 NDUFB10O96000 172 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 PLA2G5P39877 138 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 TFF2Q03403 129 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 PANK1Q8TE04 598 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 KIF1BPQ96EK5 621 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 KATNBL1Q9H079 304 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 CTDP1Q9Y5B0 961 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 DDX49Q9Y6V7 483 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 REV3LO60673 3130 aa12.14□□□□□ -0.47
NPLOC4-220ENST00000576940 ASTN1O14525 1302 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 GRIN2DO15399 1336 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 MCM3APO60318 1980 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 RFXAPO00287 272 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 ATP2A1O14983 1001 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 RASA1P20936 1047 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 UBE3CQ15386 1083 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 SLC43A3Q8NBI5 491 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 TRPV6Q9H1D0 765 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 BDP1A6H8Y1 2624 aa12.13□□□□□ -0.47
NPLOC4-220ENST00000576940 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 KCNQ1P51787 676 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 PSMC6P62333 389 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 NKX3-2P78367 333 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 TNFAIP2Q03169 654 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 ITGA7Q13683 1181 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 VWCEQ96DN2 955 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 SCLYQ96I15 445 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 HAUS7Q99871 368 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.475e-13■□□□□ 9.6
NPLOC4-220ENST00000576940 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 MTIF3Q9H2K0 278 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 HOMER2Q9NSB8 354 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 GNEQ9Y223 722 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 GBF1Q92538 1859 aa12.12□□□□□ -0.47
NPLOC4-220ENST00000576940 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 B4GALT4O60513 344 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 SMPD1P17405 629 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 ATP5JP18859 108 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 SKIV2LQ15477 1246 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 CHST13Q8NET6 341 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 NOC4LQ9BVI4 516 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 EPHX3Q9H6B9 360 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 PDGFCQ9NRA1 345 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 FBXO40Q9UH90 709 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 SLC4A7Q9Y6M7 1214 aa12.11□□□□□ -0.47
NPLOC4-220ENST00000576940 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 PRDM1O75626 825 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 SBK1Q52WX2 424 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 EEPD1Q7L9B9 569 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 FAM133AQ8N9E0 248 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 MKL1Q969V6 931 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 C1QTNF1Q9BXJ1 281 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms