RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 CCNA1P78396 465 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 IKQ13123 557 aaPredicted RBP12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 TOB2Q14106 344 aaPredicted RBP12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 ADGRF4Q8IZF3 695 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 NUP133Q8WUM0 1156 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 USP6NLQ92738 828 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 BRF1Q92994 677 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 RIOX1Q9H6W3 641 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 RAVER2Q9HCJ3 691 aaKnown RBP12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 CYP46A1Q9Y6A2 500 aa12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
SLC12A4-215ENST00000575857 NID2Q14112 1375 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 KLF18A0A0U1RQI7 1052 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 SLC25A27O95847 323 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 CALM1P0DP23 149 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 CALM2P0DP24 149 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 CALM3P0DP25 149 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 PTPREP23469 700 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 RCAN1P53805 252 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 PRKCZQ05513 592 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 PLS1Q14651 629 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 MORN1Q5T089 497 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 SNRNP48Q6IEG0 339 aaKnown RBP12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 CPXCR1Q8N123 301 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 AGBL1Q96MI9 1066 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 MROH8Q9H579 483 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 GABRQQ9UN88 632 aa12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
SLC12A4-215ENST00000575857 MGAMO43451 1857 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 ZBTB43O43298 467 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 PLEKHA8P1O95397 391 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 ICAM1P05362 532 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 TAL1P17542 331 aaPredicted RBP12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 SMARCA1P28370 1054 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 KIF5BP33176 963 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 COPB2P35606 906 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 FLT3LGP49771 235 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 PRMT2P55345 433 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 FUT2Q10981 343 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 IRF5Q13568 498 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 GRB14Q14449 540 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 TMTC3Q6ZXV5 915 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 MICU3Q86XE3 530 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 NCAPG2Q86XI2 1143 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 FANCBQ8NB91 859 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 COA7Q96BR5 231 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
SLC12A4-215ENST00000575857 PLXNB2O15031 1838 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 HOXD10P28358 340 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 CDC27P30260 824 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 GNAQP50148 359 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 CDC37Q16543 378 aaPredicted RBP12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 CCDC144CPQ8IYA2 1237 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 ABRAQ8N0Z2 381 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 SOCS4Q8WXH5 440 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 SPZ1Q9BXG8 430 aa12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
SLC12A4-215ENST00000575857 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 STRNO43815 780 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 PPP1R11O60927 126 aaPredicted RBP12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 IGHA2P01877 340 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 HOXC6P09630 235 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 FGD1P98174 961 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 RTN1Q16799 776 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 TKFCQ3LXA3 575 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 CCAR1Q8IX12 1150 aaKnown RBP12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 CHST13Q8NET6 341 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 PIGSQ96S52 555 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 LZTS2Q9BRK4 669 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
SLC12A4-215ENST00000575857 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms