RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 H0Y626 953 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 MAP4P27816 1152 aaKnown RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 TBL3Q12788 808 aaKnown RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 RBM26Q5T8P6 1007 aaKnown RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 ARHGEF18Q6ZSZ5 1173 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 TMTC2Q8N394 836 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 ATP6V1E2Q96A05 226 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 KLC2Q9H0B6 622 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 RAB20Q9NX57 234 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 RBM8AQ9Y5S9 174 aaKnown RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 SERPINB1P30740 379 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 CCDC142Q17RM4 750 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 SNX21Q969T3 373 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 BRAPQ7Z569 592 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 HEATR4Q86WZ0 1026 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 SERPINB2P05120 415 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 SDSP20132 328 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 CALML3P27482 149 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 C1orf146Q5VVC0 180 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 TAGAPQ8N103 731 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 PJA2O43164 708 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 S100A5P33763 92 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 TNNI2P48788 182 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 ZNF174Q15697 407 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 KIF19Q2TAC6 998 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 CFAP70Q5T0N1 1121 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 GIPC2Q8TF65 315 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 CCNT1O60563 726 aaKnown RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 PYGBP11216 843 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 GRIN1Q05586 938 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 HABP4Q5JVS0 413 aaKnown RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP6-206ENST00000575709 OR9Q1Q8NGQ5 310 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 PDS5BQ9NTI5 1447 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 TPP2P29144 1249 aaPredicted RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 YWHAGP61981 247 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP6-206ENST00000575709 APBA1Q02410 837 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 KRT73Q86Y46 540 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 PLD3Q8IV08 490 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 THOC1Q96FV9 657 aaKnown RBP11.48□□□□□ -0.57
USP6-206ENST00000575709 CNNM2Q9H8M5 875 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 TBC1D7Q9P0N9 293 aa11.48□□□□□ -0.57
USP6-206ENST00000575709 CAPRIN1Q14444 709 aaKnown RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 PARP9Q8IXQ6 854 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 SSH1Q8WYL5 1049 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 CDKL2Q92772 493 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 IQANK1A0A1B0GTG1 560 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 VCPP55072 806 aaKnown RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 IGBP1P78318 339 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 IPO11Q9UI26 975 aaKnown RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 SEC24DO94855 1032 aaPredicted RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 PDE1BQ01064 536 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 ESR2Q92731 530 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 C10orf88Q9H8K7 445 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 SMTNP53814 917 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 NLRP12P59046 1061 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 STRN3Q13033 797 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 CDC26Q8NHZ8 85 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 SMCR8Q8TEV9 937 aaPredicted RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 NELFBQ8WX92 580 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 FAM95CA0A1B0GW59 222 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 TCP11X2Q5H9J9 407 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 ARHGEF3Q9NR81 526 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP6-206ENST00000575709 NPHP3Q7Z494 1330 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 GNAT3A8MTJ3 354 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 TPD52L2O43399 206 aaKnown RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 AK2P54819 239 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
USP6-206ENST00000575709 FAM207AQ9NSI2 230 aaPredicted RBP11.47□□□□□ -0.57
USP6-206ENST00000575709 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.57
USP6-206ENST00000575709 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.57
USP6-206ENST00000575709 TSPAN9O75954 239 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 RXRAP19793 462 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
USP6-206ENST00000575709 ACRBPQ8NEB7 543 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 ANAPC5Q9UJX4 755 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 SGK1O00141 431 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 PPP1R2P41236 205 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 OCRLQ01968 901 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 KIF23Q02241 960 aaPredicted RBP11.46□□□□□ -0.57
USP6-206ENST00000575709 PPP6R3Q5H9R7 873 aaPredicted RBP11.46□□□□□ -0.57
USP6-206ENST00000575709 FAM47EQ6ZV65 393 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.57
USP6-206ENST00000575709 S100A9P06702 114 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms