RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC43A3Q8NBI5 491 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 AP5M1Q9H0R1 490 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 HIPK3Q9H422 1215 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
SMG6-218ENST00000575454 SLC4A7Q9Y6M7 1214 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 ATAD5Q96QE3 1844 aa10.77□□□□□ -0.68
SMG6-218ENST00000575454 CYP2D7A0A087X1C5 515 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 ASB14A6NK59 587 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 NDUFB10O96000 172 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 ATP5JP18859 108 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 TNFAIP2Q03169 654 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 ARMCX2Q7L311 632 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 RPAP2Q8IXW5 612 aaPredicted RBP10.77□□□□□ -0.69
SMG6-218ENST00000575454 CPXCR1Q8N123 301 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 KIFC2Q96AC6 838 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 HAUS7Q99871 368 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 RIPK3Q9Y572 518 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 PCDHA11Q9Y5I1 949 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
SMG6-218ENST00000575454 GTPBP6O43824 516 aaPredicted RBP10.76□□□□□ -0.69
SMG6-218ENST00000575454 PFKMP08237 780 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 MS4A1P11836 297 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 RLBP1P12271 317 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 PPP2R2DQ66LE6 453 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 OTOP2Q7RTS6 562 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 CCDC144CPQ8IYA2 1237 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 MKL1Q969V6 931 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 NUP88Q99567 741 aaPredicted RBP10.76□□□□□ -0.69
SMG6-218ENST00000575454 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMG6-218ENST00000575454 BOLA2Q9H3K6 86 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 RAVER2Q9HCJ3 691 aaKnown RBP10.76□□□□□ -0.69
SMG6-218ENST00000575454 CLIP2Q9UDT6 1046 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 Q9Y3F1 56 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 XIRP2A4UGR9 3374 aa10.76□□□□□ -0.69
SMG6-218ENST00000575454 LTBP2Q14767 1821 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 ERC2O15083 957 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 CTAGE5O15320 804 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 SUPT20HL2P0C7V6 817 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 BMP1P13497 986 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 POU3F3P20264 500 aaPredicted RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 ITGA7Q13683 1181 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 FSCN1Q16658 493 aaKnown RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 TKFCQ3LXA3 575 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 IQSEC1Q6DN90 963 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 CXCL17Q6UXB2 119 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 ZNF444Q8N0Y2 327 aaPredicted RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 GMCL1P1Q8NEA9 526 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 NOC4LQ9BVI4 516 aaKnown RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 CHMP4BQ9H444 224 aaKnown RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 ACAD9Q9H845 621 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 COG5Q9UP83 839 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
SMG6-218ENST00000575454 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
SMG6-218ENST00000575454 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 SMIM22K7EJ46 135 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 ADCY6O43306 1168 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 TTLL1O95922 423 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 RASA1P20936 1047 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 CCL23P55773 120 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
SMG6-218ENST00000575454 BEX3Q00994 111 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 TLK2Q86UE8 772 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 CHURC1Q8WUH1 139 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 KATNBL1Q9H079 304 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 GNEQ9Y223 722 aaKnown RBP10.74□□□□□ -0.69
SMG6-218ENST00000575454 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 HCN4Q9Y3Q4 1203 aa10.74□□□□□ -0.69
SMG6-218ENST00000575454 IGKV6D-41A0A0C4DH26 115 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 DYNC1LI2O43237 492 aaPredicted RBP10.73□□□□□ -0.69
SMG6-218ENST00000575454 BMP3P12645 472 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 ACTN1P12814 892 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 GNAT2P19087 354 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 TMEM67Q5HYA8 995 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 FAM160B2Q86V87 743 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 MICALL1Q8N3F8 863 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 PHOSPHO2Q8TCD6 241 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 FGD4Q96M96 766 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 STRBPQ96SI9 672 aaKnown RBP10.73□□□□□ -0.69
SMG6-218ENST00000575454 PUS7LQ9H0K6 701 aaKnown RBP10.73□□□□□ -0.69
SMG6-218ENST00000575454 BCL11AQ9H165 835 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 TRPV6Q9H1D0 765 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 MTMR4Q9NYA4 1195 aa10.73□□□□□ -0.69
SMG6-218ENST00000575454 RLFQ13129 1914 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 B4GALT4O60513 344 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 SLC3A2P08195 630 aaKnown RBP10.72□□□□□ -0.69
SMG6-218ENST00000575454 SMPD1P17405 629 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
SMG6-218ENST00000575454 RFC2P35250 354 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms