RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 DISC1Q9NRI5 854 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 SWAP70Q9UH65 585 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 SMARCA1P28370 1054 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 AOC3Q16853 763 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 KRT25Q7Z3Z0 450 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 ZDHHC15Q96MV8 337 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 DDTLA6NHG4 134 aaPredicted RBP26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 GTPBP6O43824 516 aaPredicted RBP26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 GNA11P29992 359 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 TBCKQ8TEA7 893 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 CTNND2Q9UQB3 1225 aa26.78■■□□□ 1.88
NPLOC4-217ENST00000574897 HLA-DOAP06340 250 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 SLC16A2P36021 539 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 TXLNAP40222 546 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 ASPRV1Q53RT3 343 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 ZNF592Q92610 1267 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 STYK1Q6J9G0 422 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 NYAP1Q6ZVC0 841 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 RASSF8Q8NHQ8 419 aa26.77■■□□□ 1.88
NPLOC4-217ENST00000574897 ZNF543Q08ER8 600 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 EZH2Q15910 746 aaKnown RBP26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 SPATA1Q5VX52 437 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 REXO1Q8N1G1 1221 aaKnown RBP26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 FAM198AQ9UFP1 575 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 PPP1R11O60927 126 aaPredicted RBP26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 STRIP1Q5VSL9 837 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 RRAGBQ5VZM2 374 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 KCTD1Q719H9 257 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 SH3BP5LQ7L8J4 393 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 APTXQ7Z2E3 356 aaKnown RBP26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 NEK8Q86SG6 692 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 JMJD4Q9H9V9 463 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 MAPK8IP1Q9UQF2 711 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 GDAQ9Y2T3 454 aa26.76■■□□□ 1.87
NPLOC4-217ENST00000574897 ADGRF4Q8IZF3 695 aa26.75■■□□□ 1.87
NPLOC4-217ENST00000574897 MYH7BA7E2Y1 1941 aa26.75■■□□□ 1.87
NPLOC4-217ENST00000574897 RPN1P04843 607 aaKnown RBP26.75■■□□□ 1.87
NPLOC4-217ENST00000574897 GTF2F1P35269 517 aaKnown RBP eCLIP26.75■■□□□ 1.873e-6■□□□□ 9.5
NPLOC4-217ENST00000574897 UBA7P41226 1012 aa26.75■■□□□ 1.87
NPLOC4-217ENST00000574897 CEP135Q66GS9 1140 aa26.75■■□□□ 1.87
NPLOC4-217ENST00000574897 TEX33O43247 280 aa26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 OR52Z1P0C646 297 aa26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 EN1Q05925 392 aaPredicted RBP26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 PTPN14Q15678 1187 aa26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 POTEDQ86YR6 584 aa26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 PYM1Q9BRP8 204 aaKnown RBP26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 PDGFDQ9GZP0 370 aaPredicted RBP26.74■■□□□ 1.87
NPLOC4-217ENST00000574897 CCDC96Q2M329 555 aa26.73■■□□□ 1.87
NPLOC4-217ENST00000574897 FAM177A1Q8N128 213 aaPredicted RBP26.73■■□□□ 1.87
NPLOC4-217ENST00000574897 MYO3BQ8WXR4 1341 aa26.73■■□□□ 1.87
NPLOC4-217ENST00000574897 EDIL3O43854 480 aa26.73■■□□□ 1.87
NPLOC4-217ENST00000574897 RAD21O60216 631 aa26.73■■□□□ 1.87
NPLOC4-217ENST00000574897 TBX2Q13207 712 aaPredicted RBP26.73■■□□□ 1.87
NPLOC4-217ENST00000574897 ESYT2A0FGR8 921 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 PRPHP41219 470 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 NR1I3Q14994 352 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 SLC15A2Q16348 729 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 CDKAL1Q5VV42 579 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 ZSCAN29Q8IWY8 852 aaPredicted RBP26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 PPP1R13BQ96KQ4 1090 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 RGPD3A6NKT7 1758 aaPredicted RBP26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 RGPD4Q7Z3J3 1758 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 LAD1O00515 517 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 TECP42680 631 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 UBE2SQ16763 222 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 C7orf43Q8WVR3 580 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 CCSER1Q9C0I3 900 aa26.72■■□□□ 1.87
NPLOC4-217ENST00000574897 A0A1B0GTH6 734 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 USP17L10C9JJH3 530 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 ADCY7P51828 1080 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 ADKP55263 362 aaKnown RBP26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 EHD4Q9H223 541 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 TMX1Q9H3N1 280 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 KCND1Q9NSA2 647 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 PLCG1P19174 1290 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 SPECC1LQ69YQ0 1117 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 TMEM139Q8IV31 216 aa26.71■■□□□ 1.87
NPLOC4-217ENST00000574897 TDP2O95551 362 aa26.7■■□□□ 1.87
NPLOC4-217ENST00000574897 CT47A1Q5JQC4 288 aaPredicted RBP26.7■■□□□ 1.87
NPLOC4-217ENST00000574897 ZNF658Q5TYW1 1059 aaPredicted RBP26.7■■□□□ 1.87
NPLOC4-217ENST00000574897 CABP7Q86V35 215 aa26.7■■□□□ 1.87
NPLOC4-217ENST00000574897 TDRD3Q9H7E2 651 aaKnown RBP26.7■■□□□ 1.87
NPLOC4-217ENST00000574897 SLC37A4O43826 429 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 PRCPP42785 496 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 ARFGEF1Q9Y6D6 1849 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 PNMA6FA0A0J9YX94 578 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 YDJCA8MPS7 323 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 EEF2P13639 858 aaKnown RBP26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 TC2NQ8N9U0 490 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 NELFBQ8WX92 580 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 CNKSR1Q969H4 720 aa26.69■■□□□ 1.86
NPLOC4-217ENST00000574897 C10orf71Q711Q0 1435 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 KLRC4O43908 158 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 TXKP42681 527 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 ZNF710Q8N1W2 664 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 MMTAG2Q9BU76 263 aaKnown RBP26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 IDI2Q9BXS1 227 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 KBTBD4Q9NVX7 518 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 ADD3Q9UEY8 706 aaKnown RBP26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 hCG_1984214I3L0E3 225 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms