RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 RRP36Q96EU6 259 aaKnown RBP19.81■□□□□ 0.76
NUP88-210ENST00000574867 TEX13BQ9BXU2 312 aa19.81■□□□□ 0.76
NUP88-210ENST00000574867 TXNRD2Q9NNW7 524 aa19.81■□□□□ 0.76
NUP88-210ENST00000574867 BTBD7Q9P203 1132 aa19.81■□□□□ 0.76
NUP88-210ENST00000574867 RBM27Q9P2N5 1060 aaKnown RBP19.81■□□□□ 0.76
NUP88-210ENST00000574867 ZNF214Q9UL59 606 aaPredicted RBP19.81■□□□□ 0.76
NUP88-210ENST00000574867 ZBTB5O15062 677 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 CCNA1P78396 465 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 NTRK3Q16288 839 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 CMTR1Q8N1G2 835 aaKnown RBP19.8■□□□□ 0.76
NUP88-210ENST00000574867 VAT1LQ9HCJ6 419 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 SEC63Q9UGP8 760 aaKnown RBP19.8■□□□□ 0.76
NUP88-210ENST00000574867 ICAM1P05362 532 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 COPB2P35606 906 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 SPATC1LQ9H0A9 340 aa19.8■□□□□ 0.76
NUP88-210ENST00000574867 TRAF1Q13077 416 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 QRICH1Q2TAL8 776 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 CCDC174Q6PII3 467 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 HOMER1Q86YM7 354 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 CCDC82Q8N4S0 544 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 TMX3Q96JJ7 454 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 PIGSQ96S52 555 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 RNF26Q9BY78 433 aaPredicted RBP19.79■□□□□ 0.76
NUP88-210ENST00000574867 ZNF536O15090 1300 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 PNMA6FA0A0J9YX94 578 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 STAT3P40763 770 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 PLS1Q14651 629 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 TRIM22Q8IYM9 498 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 CPXCR1Q8N123 301 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 R3HDMLQ9H3Y0 253 aa19.79■□□□□ 0.76
NUP88-210ENST00000574867 RAVER2Q9HCJ3 691 aaKnown RBP19.79■□□□□ 0.76
NUP88-210ENST00000574867 BAZ2BQ9UIF8 2168 aaKnown RBP19.78■□□□□ 0.76
NUP88-210ENST00000574867 SNAP25P60880 206 aa19.78■□□□□ 0.76
NUP88-210ENST00000574867 SNRNP48Q6IEG0 339 aaKnown RBP19.78■□□□□ 0.76
NUP88-210ENST00000574867 RIOX2Q8IUF8 465 aa19.78■□□□□ 0.76
NUP88-210ENST00000574867 HSCBQ8IWL3 235 aa19.78■□□□□ 0.76
NUP88-210ENST00000574867 SHCBP1Q8NEM2 672 aa19.78■□□□□ 0.76
NUP88-210ENST00000574867 CCPG1Q9ULG6 757 aa19.78■□□□□ 0.76
NUP88-210ENST00000574867 SLC25A27O95847 323 aa19.77■□□□□ 0.76
NUP88-210ENST00000574867 AKAP17AQ02040 695 aaKnown RBP19.77■□□□□ 0.76
NUP88-210ENST00000574867 FBXO11Q86XK2 927 aa19.77■□□□□ 0.76
NUP88-210ENST00000574867 CCDC83Q8IWF9 413 aa19.77■□□□□ 0.76
NUP88-210ENST00000574867 AMNQ9BXJ7 453 aa19.77■□□□□ 0.76
NUP88-210ENST00000574867 GPR25O00155 361 aa19.77■□□□□ 0.75
NUP88-210ENST00000574867 PRPF3O43395 683 aaKnown RBP19.77■□□□□ 0.75
NUP88-210ENST00000574867 ST3GAL1Q11201 340 aa19.77■□□□□ 0.75
NUP88-210ENST00000574867 TKFCQ3LXA3 575 aa19.77■□□□□ 0.75
NUP88-210ENST00000574867 LLPHQ9BRT6 129 aaKnown RBP19.77■□□□□ 0.75
NUP88-210ENST00000574867 SLC26A6Q9BXS9 759 aa19.77■□□□□ 0.75
NUP88-210ENST00000574867 MOV10L1Q9BXT6 1211 aaKnown RBP19.77■□□□□ 0.75
NUP88-210ENST00000574867 STK36Q9NRP7 1315 aa19.77■□□□□ 0.75
NUP88-210ENST00000574867 hCG_1984214I3L0E3 225 aa19.76■□□□□ 0.75
NUP88-210ENST00000574867 K7ELQ4 463 aaPredicted RBP19.76■□□□□ 0.75
NUP88-210ENST00000574867 FMNL1O95466 1100 aaPredicted RBP19.76■□□□□ 0.75
NUP88-210ENST00000574867 SP3Q02447 781 aa19.76■□□□□ 0.75
NUP88-210ENST00000574867 SSRP1Q08945 709 aaKnown RBP19.76■□□□□ 0.75
NUP88-210ENST00000574867 Q3C1V9 767 aa19.76■□□□□ 0.75
NUP88-210ENST00000574867 ZNF713Q8N859 430 aaPredicted RBP19.76■□□□□ 0.75
NUP88-210ENST00000574867 PHKBQ93100 1093 aa19.76■□□□□ 0.75
NUP88-210ENST00000574867 AGBL1Q96MI9 1066 aa19.76■□□□□ 0.75
NUP88-210ENST00000574867 PEX10O60683 326 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 PIBF1Q8WXW3 757 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 MROH8Q9H579 483 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 V9GY48 417 aaPredicted RBP19.75■□□□□ 0.75
NUP88-210ENST00000574867 ABCB11O95342 1321 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 CTDNEP1O95476 244 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 MAPK4P31152 587 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
NUP88-210ENST00000574867 NSUN7Q8NE18 718 aaKnown RBP19.75■□□□□ 0.75
NUP88-210ENST00000574867 FBXO40Q9UH90 709 aa19.75■□□□□ 0.75
NUP88-210ENST00000574867 RBBP6Q7Z6E9 1792 aaKnown RBP19.75■□□□□ 0.75
NUP88-210ENST00000574867 PTPDC1A2A3K4 754 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 MGAMO43451 1857 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 DEXIO95424 95 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 LACTBP83111 547 aaPredicted RBP19.74■□□□□ 0.75
NUP88-210ENST00000574867 CHST13Q8NET6 341 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 PPP1R11O60927 126 aaPredicted RBP19.74■□□□□ 0.75
NUP88-210ENST00000574867 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
NUP88-210ENST00000574867 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
NUP88-210ENST00000574867 ERCC3P19447 782 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 KIF22Q14807 665 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 PFKFB3Q16875 520 aaPredicted RBP19.74■□□□□ 0.75
NUP88-210ENST00000574867 USH1GQ495M9 461 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 NCAPG2Q86XI2 1143 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 PORCNQ9H237 461 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 PCDHA1Q9Y5I3 950 aa19.74■□□□□ 0.75
NUP88-210ENST00000574867 PCNTO95613 3336 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 hCG_1642624A0A1W2PR95 340 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 FKTNO75072 461 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 ALAS1P13196 640 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 SCG2P13521 617 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 ACAD9Q9H845 621 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 RNF146Q9NTX7 359 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 TSKSQ9UJT2 592 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 ZNF236Q9UL36 1845 aa19.73■□□□□ 0.75
NUP88-210ENST00000574867 SLC4A3P48751 1232 aa19.72■□□□□ 0.75
NUP88-210ENST00000574867 HMGN5P82970 282 aaKnown RBP19.72■□□□□ 0.75
NUP88-210ENST00000574867 CUL4AQ13619 759 aa19.72■□□□□ 0.75
NUP88-210ENST00000574867 PPP1R18Q6NYC8 613 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms