RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
TVP23A-208ENST00000573857 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
TVP23A-208ENST00000573857 TSEN34Q9BSV6 310 aaKnown RBP16.94■□□□□ 0.3
TVP23A-208ENST00000573857 MTMR10Q9NXD2 777 aa16.94■□□□□ 0.3
TVP23A-208ENST00000573857 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.94■□□□□ 0.3
TVP23A-208ENST00000573857 ZNF536O15090 1300 aa16.94■□□□□ 0.3
TVP23A-208ENST00000573857 UNC80Q8N2C7 3258 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 ORC4O43929 436 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
TVP23A-208ENST00000573857 PLA2G6O60733 806 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 NOVP48745 357 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 KLHDC9Q8NEP7 349 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 BADQ92934 168 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 AGBL1Q96MI9 1066 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 ABHD16BQ9H3Z7 469 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 EYSQ5T1H1 3165 aa16.93■□□□□ 0.3
TVP23A-208ENST00000573857 CDH23Q9H251 3354 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 DUSP11O75319 330 aaKnown RBP16.92■□□□□ 0.3
TVP23A-208ENST00000573857 CLTBP09497 229 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 FGRP09769 529 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 ACLYP53396 1101 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 CNTN2Q02246 1040 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 RCSD1Q6JBY9 416 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 RASGRP2Q7LDG7 609 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 RNF146Q9NTX7 359 aa16.92■□□□□ 0.3
TVP23A-208ENST00000573857 MYADML2A6NDP7 307 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 MOXD2PA6NHM9 499 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 ADCY6O43306 1168 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 PQBP1O60828 265 aaKnown RBP16.91■□□□□ 0.3
TVP23A-208ENST00000573857 FGAP02671 866 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 CST5P28325 142 aaPredicted RBP16.91■□□□□ 0.3
TVP23A-208ENST00000573857 AAMPQ13685 434 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 SHHQ15465 462 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 KCNA10Q16322 511 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 CCDC144BQ3MJ40 725 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 C9orf50Q5SZB4 431 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 CCSAPQ6IQ19 270 aaPredicted RBP16.91■□□□□ 0.3
TVP23A-208ENST00000573857 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 FAM133AQ8N9E0 248 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 SLC17A8Q8NDX2 589 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 KATNBL1Q9H079 304 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 A1CFQ9NQ94 594 aaKnown RBP16.91■□□□□ 0.3
TVP23A-208ENST00000573857 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 PRR12Q9ULL5 1215 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 STXBP5LQ9Y2K9 1186 aa16.91■□□□□ 0.3
TVP23A-208ENST00000573857 HSPD1P10809 573 aaKnown RBP16.9■□□□□ 0.3
TVP23A-208ENST00000573857 ITGB8P26012 769 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 SNAP25P60880 206 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 FAM109BQ6ICB4 259 aaPredicted RBP16.9■□□□□ 0.3
TVP23A-208ENST00000573857 CCDC174Q6PII3 467 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 ANKRD33Q7Z3H0 272 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 ZNF589Q86UQ0 364 aaPredicted RBP16.9■□□□□ 0.3
TVP23A-208ENST00000573857 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
TVP23A-208ENST00000573857 MTMR7Q9Y216 660 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
TVP23A-208ENST00000573857 KIAA0355O15063 1070 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
TVP23A-208ENST00000573857 ALAS1P13196 640 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 GJA9P57773 515 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 IRX5P78411 483 aaPredicted RBP16.89■□□□□ 0.29
TVP23A-208ENST00000573857 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.29
TVP23A-208ENST00000573857 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 DCAF4Q8WV16 495 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 TOX2Q96NM4 488 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 SPC25Q9HBM1 224 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 TOMM22Q9NS69 142 aa16.89■□□□□ 0.29
TVP23A-208ENST00000573857 SOWAHBA6NEL2 793 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 MUM1L1Q5H9M0 696 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
TVP23A-208ENST00000573857 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
TVP23A-208ENST00000573857 TCP11L1Q9NUJ3 509 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 ELP1O95163 1332 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 CCDC171Q6TFL3 1326 aa16.88■□□□□ 0.29
TVP23A-208ENST00000573857 ASB14A6NK59 587 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 ASGR1P07306 291 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 TOP1P11387 765 aaKnown RBP16.87■□□□□ 0.29
TVP23A-208ENST00000573857 RAG1P15918 1043 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 HAND2P61296 217 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 GNASQ5JWF2 1037 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 TTBK2Q6IQ55 1244 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 GLT1D1Q96MS3 346 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 TMEM47Q9BQJ4 181 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms