RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 HOMER2Q9NSB8 354 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 ATP11BQ9Y2G3 1177 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
LITAF-211ENST00000572255 PGK1P00558 417 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 SDSP20132 328 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 RNF180Q86T96 592 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 TDHQ8IZJ6 230 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 LENG1Q96BZ8 264 aaPredicted RBP20.48■□□□□ 0.87
LITAF-211ENST00000572255 PHF24Q9UPV7 400 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 ZNF536O15090 1300 aa20.48■□□□□ 0.87
LITAF-211ENST00000572255 HAND2P61296 217 aa20.47■□□□□ 0.87
LITAF-211ENST00000572255 SNX17Q15036 470 aa20.47■□□□□ 0.87
LITAF-211ENST00000572255 FGD4Q96M96 766 aa20.47■□□□□ 0.87
LITAF-211ENST00000572255 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
LITAF-211ENST00000572255 ACAD9Q9H845 621 aa20.47■□□□□ 0.87
LITAF-211ENST00000572255 RNF146Q9NTX7 359 aa20.47■□□□□ 0.87
LITAF-211ENST00000572255 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
LITAF-211ENST00000572255 LTBP2Q14767 1821 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 MFAP1P55081 439 aaKnown RBP20.46■□□□□ 0.87
LITAF-211ENST00000572255 CCDC96Q2M329 555 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 TRIM60Q495X7 471 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 DCAF4Q8WV16 495 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 LBHD1Q9BQE6 289 aaPredicted RBP20.46■□□□□ 0.87
LITAF-211ENST00000572255 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
LITAF-211ENST00000572255 PRKAG2Q9UGJ0 569 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 FAM184BQ9ULE4 1060 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 PRR12Q9ULL5 1215 aa20.46■□□□□ 0.87
LITAF-211ENST00000572255 ADAMTS4O75173 837 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
LITAF-211ENST00000572255 SNAP25P60880 206 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 TKFCQ3LXA3 575 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 LRIT3Q3SXY7 679 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 CCDC174Q6PII3 467 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 A1CFQ9NQ94 594 aaKnown RBP20.45■□□□□ 0.86
LITAF-211ENST00000572255 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 LAMA4Q16363 1823 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 SYNRGQ9UMZ2 1314 aa20.45■□□□□ 0.86
LITAF-211ENST00000572255 POTEB2H3BUK9 544 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 PCP11498 1178 aaKnown RBP20.44■□□□□ 0.86
LITAF-211ENST00000572255 ALAS1P13196 640 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 CNTN2Q02246 1040 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 ACVR2BQ13705 512 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 AKNAD1Q5T1N1 836 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 C1orf53Q5VUE5 145 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 MFSD6Q6ZSS7 791 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 ARMCX2Q7L311 632 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 TBC1D10CQ8IV04 446 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 TRERF1Q96PN7 1200 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 ABHD16BQ9H3Z7 469 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
LITAF-211ENST00000572255 CWC27Q6UX04 472 aaKnown RBP20.43■□□□□ 0.86
LITAF-211ENST00000572255 CCDC144CPQ8IYA2 1237 aa20.43■□□□□ 0.86
LITAF-211ENST00000572255 FAM133AQ8N9E0 248 aa20.43■□□□□ 0.86
LITAF-211ENST00000572255 PRDM5Q9NQX1 630 aaPredicted RBP20.43■□□□□ 0.86
LITAF-211ENST00000572255 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
LITAF-211ENST00000572255 A0A1W2PQ45 241 aaPredicted RBP20.42■□□□□ 0.86
LITAF-211ENST00000572255 A0A1W2PQY0 241 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 DUSP11O75319 330 aaKnown RBP20.42■□□□□ 0.86
LITAF-211ENST00000572255 SLC16A2P36021 539 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 CCDC144BQ3MJ40 725 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 TTBK2Q6IQ55 1244 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 BTNL9Q6UXG8 535 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 TSEN34Q9BSV6 310 aaKnown RBP20.42■□□□□ 0.86
LITAF-211ENST00000572255 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
LITAF-211ENST00000572255 PDLIM7Q9NR12 457 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 CCPG1Q9ULG6 757 aa20.42■□□□□ 0.86
LITAF-211ENST00000572255 SOWAHBA6NEL2 793 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 HIP1O00291 1037 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 ADCY6O43306 1168 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 ACLYP53396 1101 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 TLE2Q04725 743 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 SYDE2Q5VT97 1194 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 KLHDC9Q8NEP7 349 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 KATNBL1Q9H079 304 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
LITAF-211ENST00000572255 GPCPD1Q9NPB8 672 aa20.41■□□□□ 0.86
LITAF-211ENST00000572255 FRMPD2Q68DX3 1309 aaPredicted RBP20.41■□□□□ 0.86
LITAF-211ENST00000572255 LRRC37A2A6NM11 1700 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 ZNF213O14771 459 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 ICAM1P05362 532 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 LAMA2P24043 3122 aaKnown RBP20.4■□□□□ 0.86
LITAF-211ENST00000572255 NEDD4P46934 1319 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 GPR153Q6NV75 609 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 SH3RF1Q7Z6J0 888 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 ESR2Q92731 530 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 TTC14Q96N46 770 aa20.4■□□□□ 0.86
LITAF-211ENST00000572255 LCTP09848 1927 aa20.39■□□□□ 0.86
LITAF-211ENST00000572255 MYADML2A6NDP7 307 aa20.39■□□□□ 0.85
LITAF-211ENST00000572255 PDHBP11177 359 aa20.39■□□□□ 0.85
LITAF-211ENST00000572255 KCNA10Q16322 511 aa20.39■□□□□ 0.85
LITAF-211ENST00000572255 CCSAPQ6IQ19 270 aaPredicted RBP20.39■□□□□ 0.85
LITAF-211ENST00000572255 UPF3AQ9H1J1 476 aaKnown RBP20.39■□□□□ 0.85
LITAF-211ENST00000572255 CYP39A1Q9NYL5 469 aa20.39■□□□□ 0.85
LITAF-211ENST00000572255 ASTN1O14525 1302 aa20.38■□□□□ 0.85
LITAF-211ENST00000572255 TRIM43BA6NCK2 446 aa20.38■□□□□ 0.85
LITAF-211ENST00000572255 MOXD2PA6NHM9 499 aa20.38■□□□□ 0.85
LITAF-211ENST00000572255 ASB14A6NK59 587 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms