RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 TKFCQ3LXA3 575 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 ZMYM1Q5SVZ6 1142 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 PI4K2BQ8TCG2 481 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 GMCL1Q96IK5 515 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 FAM161BQ96MY7 647 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 SEMA6BQ9H3T3 888 aa18.46■□□□□ 0.55
TSR1-202ENST00000571806 TMEM232C9JQI7 657 aa18.45■□□□□ 0.54
TSR1-202ENST00000571806 C6orf222P0C671 652 aaPredicted RBP18.45■□□□□ 0.54
TSR1-202ENST00000571806 SLC1A4P43007 532 aa18.45■□□□□ 0.54
TSR1-202ENST00000571806 GJA9P57773 515 aa18.45■□□□□ 0.54
TSR1-202ENST00000571806 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
TSR1-202ENST00000571806 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
TSR1-202ENST00000571806 LRRC47Q8N1G4 583 aaKnown RBP18.45■□□□□ 0.54
TSR1-202ENST00000571806 STAG1Q8WVM7 1258 aa18.45■□□□□ 0.54
TSR1-202ENST00000571806 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
TSR1-202ENST00000571806 ACAD9Q9H845 621 aa18.45■□□□□ 0.54
TSR1-202ENST00000571806 ZBTB47Q9UFB7 747 aaPredicted RBP18.45■□□□□ 0.54
TSR1-202ENST00000571806 A0A0C4DFX4 3053 aa18.44■□□□□ 0.54
TSR1-202ENST00000571806 ASB14A6NK59 587 aa18.44■□□□□ 0.54
TSR1-202ENST00000571806 MX1P20591 662 aa18.44■□□□□ 0.54
TSR1-202ENST00000571806 ITGB8P26012 769 aa18.44■□□□□ 0.54
TSR1-202ENST00000571806 CCDC144BQ3MJ40 725 aa18.44■□□□□ 0.54
TSR1-202ENST00000571806 ARMCX2Q7L311 632 aa18.44■□□□□ 0.54
TSR1-202ENST00000571806 LENG1Q96BZ8 264 aaPredicted RBP18.44■□□□□ 0.54
TSR1-202ENST00000571806 SEC62Q99442 399 aaKnown RBP18.44■□□□□ 0.54
TSR1-202ENST00000571806 CDX2Q99626 313 aaPredicted RBP18.44■□□□□ 0.54
TSR1-202ENST00000571806 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
TSR1-202ENST00000571806 TIMP1P01033 207 aa18.43■□□□□ 0.54
TSR1-202ENST00000571806 ASGR1P07306 291 aa18.43■□□□□ 0.54
TSR1-202ENST00000571806 NKX3-2P78367 333 aa18.43■□□□□ 0.54
TSR1-202ENST00000571806 IKQ13123 557 aaPredicted RBP18.43■□□□□ 0.54
TSR1-202ENST00000571806 TICAM2Q86XR7 235 aa18.43■□□□□ 0.54
TSR1-202ENST00000571806 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
TSR1-202ENST00000571806 ISY1Q9ULR0 285 aaKnown RBP18.43■□□□□ 0.54
TSR1-202ENST00000571806 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
TSR1-202ENST00000571806 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.42■□□□□ 0.54
TSR1-202ENST00000571806 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.42■□□□□ 0.54
TSR1-202ENST00000571806 TSPY2A6NKD2 308 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 CDK7P50613 346 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 GNASQ5JWF2 1037 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 RCSD1Q6JBY9 416 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 FAM133AQ8N9E0 248 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 VTI1AQ96AJ9 217 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 SEZ6LQ9BYH1 1024 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
TSR1-202ENST00000571806 ARVCFO00192 962 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 TLR3O15455 904 aaKnown RBP18.41■□□□□ 0.54
TSR1-202ENST00000571806 CABYRO75952 493 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 CCDC129Q6ZRS4 1044 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 FGD4Q96M96 766 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 HOMER2Q9NSB8 354 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 RNF146Q9NTX7 359 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 TBX21Q9UL17 535 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
TSR1-202ENST00000571806 MCCP23508 829 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 TNFAIP2Q03169 654 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.541e-9■□□□□ 8.3
TSR1-202ENST00000571806 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 EVI5LQ96CN4 794 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 TRERF1Q96PN7 1200 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 A1CFQ9NQ94 594 aaKnown RBP18.4■□□□□ 0.54
TSR1-202ENST00000571806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
TSR1-202ENST00000571806 UNC80Q8N2C7 3258 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 ZNF536O15090 1300 aa18.4■□□□□ 0.54
TSR1-202ENST00000571806 MYADML2A6NDP7 307 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 ZEB2O60315 1214 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 EPHB4P54760 987 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 CNTN2Q02246 1040 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 MAFAQ8NHW3 353 aaPredicted RBP18.39■□□□□ 0.53
TSR1-202ENST00000571806 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 TTYH1Q9H313 450 aaPredicted RBP18.39■□□□□ 0.53
TSR1-202ENST00000571806 IL17RBQ9NRM6 502 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 HELLSQ9NRZ9 838 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 Q9Y3F1 56 aa18.39■□□□□ 0.53
TSR1-202ENST00000571806 ADCY6O43306 1168 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 ORC4O43929 436 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 RANBP6O60518 1105 aaKnown RBP18.38■□□□□ 0.53
TSR1-202ENST00000571806 ALAS1P13196 640 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 NOVP48745 357 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 ALX1Q15699 326 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 IQSEC1Q6DN90 963 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
TSR1-202ENST00000571806 DCAF4Q8WV16 495 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 PNMA2Q9UL42 364 aa18.38■□□□□ 0.53
TSR1-202ENST00000571806 LOC102724159A0A0B4J2E5 919 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 FGRP09769 529 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 PWP2Q15269 919 aaKnown RBP18.37■□□□□ 0.53
TSR1-202ENST00000571806 KCTD1Q719H9 257 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 FAM126BQ8IXS8 530 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
TSR1-202ENST00000571806 COL25A1Q9BXS0 654 aaPredicted RBP18.37■□□□□ 0.53
TSR1-202ENST00000571806 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 PRR12Q9ULL5 1215 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
TSR1-202ENST00000571806 SALL3Q9BXA9 1300 aa18.37■□□□□ 0.53
TSR1-202ENST00000571806 MCM3APO60318 1980 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms