RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 PSEN1P49768 467 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 PTGDRQ13258 359 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 NNTQ13423 1086 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 SPA17Q15506 151 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 LRRC1Q9BTT6 524 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 DONSONQ9NYP3 566 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 STIM2Q9P246 746 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 RIPOR2Q9Y4F9 1068 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 MBD4O95243 580 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 FNTAP49354 379 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 ZBED6P86452 979 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 TTMPQ5BVD1 217 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 TTC19Q6DKK2 380 aaPredicted RBP17.2■□□□□ 0.34
SMG6-207ENST00000570756 LDHAL6AQ6ZMR3 332 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 SPATA4Q8NEY3 305 aa17.2■□□□□ 0.34
SMG6-207ENST00000570756 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
SMG6-207ENST00000570756 RCCD1A6NED2 376 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 PCCAP05165 728 aaPredicted RBP17.19■□□□□ 0.34
SMG6-207ENST00000570756 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
SMG6-207ENST00000570756 GNAT2P19087 354 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 RDXP35241 583 aaKnown RBP17.19■□□□□ 0.34
SMG6-207ENST00000570756 TDO2P48775 406 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 CDK17Q00537 523 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 PDCLQ13371 301 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 EARS2Q5JPH6 523 aaKnown RBP17.19■□□□□ 0.34
SMG6-207ENST00000570756 ADSSL1Q8N142 457 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 EXOC1Q9NV70 894 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 DMGDHQ9UI17 866 aaKnown RBP17.19■□□□□ 0.34
SMG6-207ENST00000570756 GDAQ9Y2T3 454 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 CLSTN1O94985 981 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 A1BGP04217 495 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 SRGNP10124 158 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 ARID4AP29374 1257 aaPredicted RBP17.19■□□□□ 0.34
SMG6-207ENST00000570756 MAP3K12Q12852 859 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 TCIRG1Q13488 830 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 CCDC181Q5TID7 509 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 MAPK8IP1Q9UQF2 711 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 MYH2Q9UKX2 1941 aa17.19■□□□□ 0.34
SMG6-207ENST00000570756 KDM7AQ6ZMT4 941 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 HDAC7Q8WUI4 952 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 ARL8AQ96BM9 186 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 MTRQ99707 1265 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 TTYH3Q9C0H2 523 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 PSMA7O14818 248 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 PRPF3O43395 683 aaKnown RBP17.18■□□□□ 0.34
SMG6-207ENST00000570756 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
SMG6-207ENST00000570756 CCDC96Q2M329 555 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 TRIM47Q96LD4 638 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 EPN3Q9H201 632 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 HYOU1Q9Y4L1 999 aa17.18■□□□□ 0.34
SMG6-207ENST00000570756 GSG1L2A8MUP6 293 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 CHUKO15111 745 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 GPTP24298 496 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 PAFAH1B1P43034 410 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
SMG6-207ENST00000570756 PKN1Q16512 942 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 GLE1Q53GS7 698 aaKnown RBP17.17■□□□□ 0.34
SMG6-207ENST00000570756 TSEN2Q8NCE0 465 aaKnown RBP17.17■□□□□ 0.34
SMG6-207ENST00000570756 IQCDQ96DY2 449 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 CCDC42Q96M95 316 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 TRIM49BA6NDI0 452 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 C8orf74Q6P047 294 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 MAGEB6Q8N7X4 407 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 GIMAP7Q8NHV1 300 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 JPH2Q9BR39 696 aaPredicted RBP17.17■□□□□ 0.34
SMG6-207ENST00000570756 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 GGA2Q9UJY4 613 aa17.17■□□□□ 0.34
SMG6-207ENST00000570756 B4DLN1 442 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 MYO1FO00160 1098 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 WNT7AO00755 349 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 LSP1P33241 339 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 STAT6P42226 847 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 NAP1L1P55209 391 aaKnown RBP17.16■□□□□ 0.34
SMG6-207ENST00000570756 ZBTB38Q8NAP3 1195 aaPredicted RBP17.16■□□□□ 0.34
SMG6-207ENST00000570756 TTLL11Q8NHH1 800 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 FAM89AQ96GI7 184 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 ZIM3Q96PE6 472 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 OSBPL9Q96SU4 736 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 PHKA1P46020 1223 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 KCNB1Q14721 858 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 EMC10Q5UCC4 262 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 NAA35Q5VZE5 725 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 HAUS3Q68CZ6 603 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 TNFRSF25Q93038 417 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms