RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
CIITA-204ENST00000570546 CABS1Q96KC9 395 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 TRIM7Q9C029 511 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 RAB17Q9H0T7 212 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 HARSP12081 509 aaKnown RBP16.95■□□□□ 0.3
CIITA-204ENST00000570546 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
CIITA-204ENST00000570546 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 AGTPBP1Q9UPW5 1226 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 ENC1O14682 589 aa16.95■□□□□ 0.3
CIITA-204ENST00000570546 LIFRP42702 1097 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 KRT71Q3SY84 523 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 CCDC105Q8IYK2 499 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 CTNNA1P35221 906 aaKnown RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 GTF2IP78347 998 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 RESP18Q5W5W9 173 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 DHTKD1Q96HY7 919 aaPredicted RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 MAK16Q9BXY0 300 aaKnown RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 RWDD2AQ9UIY3 292 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 SEMA3EO15041 775 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 STAT1P42224 750 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 EEF2KMTQ96G04 330 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 ARMCX3Q9UH62 379 aaPredicted RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 PRPF3O43395 683 aaKnown RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 FERP16591 822 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 PRR16Q569H4 304 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 CEP85LQ5SZL2 805 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 SLFN12Q8IYM2 578 aa16.94■□□□□ 0.3
CIITA-204ENST00000570546 RSRC1Q96IZ7 334 aaKnown RBP16.94■□□□□ 0.3
CIITA-204ENST00000570546 KRIT1O00522 736 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
CIITA-204ENST00000570546 ALDH3A1P30838 453 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 ACRBPQ8NEB7 543 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 PAGE5Q96GU1 130 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 CLCN6P51797 869 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 DENND2CQ68D51 928 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 P2RX5Q93086 422 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 ZNF804BA4D1E1 1349 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 STRN3Q13033 797 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 UAP1Q16222 522 aaPredicted RBP16.93■□□□□ 0.3
CIITA-204ENST00000570546 CAPS2Q9BXY5 557 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 PPFIA4O75335 1185 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 FAM26FQ5R3K3 315 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 PANX2Q96RD6 677 aa16.93■□□□□ 0.3
CIITA-204ENST00000570546 ALDH8A1Q9H2A2 487 aaPredicted RBP16.93■□□□□ 0.3
CIITA-204ENST00000570546 RPAP1Q9BWH6 1393 aaPredicted RBP16.92■□□□□ 0.3
CIITA-204ENST00000570546 RDH13Q8NBN7 331 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 GJB4Q9NTQ9 266 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 ABCB4P21439 1286 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 CYP2J2P51589 502 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 ADAM9Q13443 819 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 PPANQ9NQ55 473 aaKnown RBP16.92■□□□□ 0.3
CIITA-204ENST00000570546 FAM170AA1A519 330 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 MCAMP43121 646 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 MRRFQ96E11 262 aaKnown RBP16.92■□□□□ 0.3
CIITA-204ENST00000570546 AK8Q96MA6 479 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 LOC102724428A0A0B4J2F2 783 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 SIK1P57059 783 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 RASSF7Q02833 373 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 PARP2Q9UGN5 583 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 SERPINA10Q9UK55 444 aa16.92■□□□□ 0.3
CIITA-204ENST00000570546 FBXO38Q6PIJ6 1188 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 PARD6BQ9BYG5 372 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 GAS7O60861 476 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 ATP11AP98196 1134 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
CIITA-204ENST00000570546 ANKRD13CQ8N6S4 541 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 EPSTI1Q96J88 318 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 HINFPQ9BQA5 517 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 PTPROQ16827 1216 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 MCTP2Q6DN12 878 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 DKC1O60832 514 aaKnown RBP eCLIP16.91■□□□□ 0.3
CIITA-204ENST00000570546 ATP1A2P50993 1020 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 FMR1NBQ8N0W7 255 aaPredicted RBP16.91■□□□□ 0.3
CIITA-204ENST00000570546 LARP4BQ92615 738 aaKnown RBP16.91■□□□□ 0.3
CIITA-204ENST00000570546 BPIFA3Q9BQP9 254 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 CRB1P82279 1406 aa16.91■□□□□ 0.3
CIITA-204ENST00000570546 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
CIITA-204ENST00000570546 FYB2Q5VWT5 728 aa16.9■□□□□ 0.3
CIITA-204ENST00000570546 TEKT1Q969V4 418 aa16.9■□□□□ 0.3
CIITA-204ENST00000570546 FAM204AQ9H8W3 233 aa16.9■□□□□ 0.3
CIITA-204ENST00000570546 USTQ9Y2C2 406 aa16.9■□□□□ 0.3
CIITA-204ENST00000570546 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
CIITA-204ENST00000570546 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
CIITA-204ENST00000570546 STRBPQ96SI9 672 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms