RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 MAP3K14Q99558 947 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 WDR18Q9BV38 432 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 CTDP1Q9Y5B0 961 aaPredicted RBP7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 MYH8P13535 1937 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 GREB1LQ9C091 1923 aaPredicted RBP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 A0A1W2PRG0 241 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 F5H6K3 240 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 TK2O00142 265 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 GOLGA8HP0CJ92 632 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 XBP1P17861 261 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 VCAM1P19320 739 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 ZNF157P51786 506 aaPredicted RBP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 GTF2A2P52657 109 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 KLRC3Q07444 240 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 SSRP1Q08945 709 aaKnown RBP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 ZNF543Q08ER8 600 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 PABPC4Q13310 644 aaKnown RBP eCLIP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 SNAPC2Q13487 334 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 TRIM29Q14134 588 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 FAM83BQ5T0W9 1011 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 LDLRAD1Q5T700 205 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 GADL1Q6ZQY3 521 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 TMTC3Q6ZXV5 915 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 KCTD1Q719H9 257 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 RASGRP2Q7LDG7 609 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 FAM160B2Q86V87 743 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 MKL1Q969V6 931 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 RRP36Q96EU6 259 aaKnown RBP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 INTS4Q96HW7 963 aaKnown RBP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 WNK4Q96J92 1243 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 PHOX2BQ99453 314 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 LLPHQ9BRT6 129 aaKnown RBP7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 TMUB1Q9BVT8 246 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 SLC26A6Q9BXS9 759 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 GPCPD1Q9NPB8 672 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 HPS5Q9UPZ3 1129 aa7.63□□□□□ -1.19
CTDNEP1-204ENST00000570484 OTOFQ9HC10 1997 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CNTNAP5Q8WYK1 1306 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 STK36Q9NRP7 1315 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 TMEM232C9JQI7 657 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 KLRF2D3W0D1 207 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 C3orf80F5H4A9 247 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CXCL11O14625 94 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 FLOT1O75955 427 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 PLEKHA8P1O95397 391 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 DEXIO95424 95 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 SNHG28P0DPA3 235 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 ZBTB48P10074 688 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CETPP11597 493 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 IFNAR1P17181 557 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 PDCP20941 246 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CDC27P30260 824 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 IRX3P78415 501 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 GRM1Q13255 1194 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CUL4AQ13619 759 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 FASTKD5Q7L8L6 764 aaKnown RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 METTL3Q86U44 580 aaKnown RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 HOMER1Q86YM7 354 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CCDC82Q8N4S0 544 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 PROCA1Q8NCQ7 364 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CHURC1Q8WUH1 139 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 DDX11Q96FC9 970 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 C12orf42Q96LP6 360 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 NUP88Q99567 741 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 SPZ1Q9BXG8 430 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 RNF26Q9BY78 433 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 RPAP3Q9H6T3 665 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 ORC3Q9UBD5 711 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 MAD2L2Q9UI95 211 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 FEM1BQ9UK73 627 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 AFG3L2Q9Y4W6 797 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
CTDNEP1-204ENST00000570484 CCL15-CCL14A0A0B4J2E2 113 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 A0A0G2JLL6 359 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 BHMG1C9JSJ3 638 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 H3BQV1 296 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 FMNL1O95466 1100 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 GJB2P29033 226 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 ADD1P35611 737 aaKnown RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 SLC4A3P48751 1232 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 TRAF1Q13077 416 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 GNL2Q13823 731 aaKnown RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 CDC37Q16543 378 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 CCL15Q16663 113 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 PROX2Q3B8N5 592 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 IFFO2Q5TF58 517 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 SYDE2Q5VT97 1194 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 CST9Q5W186 159 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 RGMBQ6NW40 437 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 HEATR3Q7Z4Q2 680 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 PRRT2Q7Z6L0 340 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 SAPCD2Q86UD0 394 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 RASAL3Q86YV0 1011 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 SIAH1Q8IUQ4 282 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 CMTR1Q8N1G2 835 aaKnown RBP7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 STAG2Q8N3U4 1231 aa7.61□□□□□ -1.19
CTDNEP1-204ENST00000570484 NSUN7Q8NE18 718 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms