RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LAMA3Q16787 3333 aa20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 SNAI1O95863 264 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 SNHG28P0DPA3 235 aa20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 KCTD1Q719H9 257 aa20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 TBC1D10CQ8IV04 446 aa20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 ANKRD35Q8N283 1001 aa20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 PRR12Q9ULL5 1215 aa20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 ZMYND8Q9ULU4 1186 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-208ENST00000570189 TAL1P17542 331 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 PDE4AP27815 886 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 HAND2P61296 217 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 GJC2Q5T442 439 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CWC27Q6UX04 472 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 FAM133AQ8N9E0 248 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ESR2Q92731 530 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RANBP17Q9H2T7 1088 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ABHD16BQ9H3Z7 469 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 TOMM22Q9NS69 142 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RAD50Q92878 1312 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ZNF213O14771 459 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 MAGEA10P43363 369 aaPredicted RBP20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RRP12Q5JTH9 1297 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 TTC22Q5TAA0 569 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 AGBL1Q96MI9 1066 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 TSEN34Q9BSV6 310 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 XPNPEP3Q9NQH7 507 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RNF146Q9NTX7 359 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 PNMA2Q9UL42 364 aa20.13■□□□□ 0.81
MAP1LC3B-208ENST00000570189 NEDD4P46934 1319 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ADAMTS4O75173 837 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ICAM1P05362 532 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 PDHBP11177 359 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 IKQ13123 557 aaPredicted RBP20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ANO1Q5XXA6 986 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 SLC39A5Q6ZMH5 540 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RASGRP2Q7LDG7 609 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RNF180Q86T96 592 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ANKS1AQ92625 1134 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 A1CFQ9NQ94 594 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 FAM184BQ9ULE4 1060 aa20.12■□□□□ 0.81
MAP1LC3B-208ENST00000570189 DUSP11O75319 330 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 GSPT1P15170 499 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CST5P28325 142 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 RTP1P59025 263 aa20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 NKX3-2P78367 333 aa20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ARMCX2Q7L311 632 aa20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 TRERF1Q96PN7 1200 aa20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 KATNBL1Q9H079 304 aa20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CTNNA3Q9UI47 895 aa20.11■□□□□ 0.81
MAP1LC3B-208ENST00000570189 LOC102724159A0A0B4J2E5 919 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 SYN1P17600 705 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ZNF543Q08ER8 600 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ACVR2BQ13705 512 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 PWP2Q15269 919 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 SYDE2Q5VT97 1194 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 KLHDC9Q8NEP7 349 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 HOMER2Q9NSB8 354 aa20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ISY1Q9ULR0 285 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-208ENST00000570189 SYNRGQ9UMZ2 1314 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ASB14A6NK59 587 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 POTEB2H3BUK9 544 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ADCYAP1R1P41586 468 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 IMMTQ16891 758 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 LRIT3Q3SXY7 679 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 GPATCH4Q5T3I0 446 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CCSAPQ6IQ19 270 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 GPR153Q6NV75 609 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 IQCA1Q86XH1 822 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CCDC144CPQ8IYA2 1237 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 MAF1Q9H063 256 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 UPF3AQ9H1J1 476 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CYP39A1Q9NYL5 469 aa20.09■□□□□ 0.81
MAP1LC3B-208ENST00000570189 WDR19Q8NEZ3 1342 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 MYH6P13533 1939 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 MOXD2PA6NHM9 499 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 PGK1P00558 417 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ALAS1P13196 640 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 SLC4A3P48751 1232 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ATN1P54259 1190 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CNTN2Q02246 1040 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 TTBK2Q6IQ55 1244 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 TDHQ8IZJ6 230 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CNNM2Q9H8M5 875 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 ZHX1Q9UKY1 873 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 CCPG1Q9ULG6 757 aa20.08■□□□□ 0.81
MAP1LC3B-208ENST00000570189 A0A1W2PQ45 241 aaPredicted RBP20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 A0A1W2PQY0 241 aa20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 SOWAHBA6NEL2 793 aa20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 MUM1L1Q5H9M0 696 aa20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 CCDC174Q6PII3 467 aa20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 KRT23Q9C075 422 aa20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 IL25Q9H293 177 aa20.07■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ASTN1O14525 1302 aa20.06■□□□□ 0.8
MAP1LC3B-208ENST00000570189 KDM4AO75164 1064 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms