RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 DUSP11O75319 330 aaKnown RBP12.17□□□□□ -0.46
RPAP1-212ENST00000569829 MBD4O95243 580 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 ACVR2BQ13705 512 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 CCDC144BQ3MJ40 725 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 SNRNP48Q6IEG0 339 aaKnown RBP12.17□□□□□ -0.46
RPAP1-212ENST00000569829 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPAP1-212ENST00000569829 LRRCC1Q9C099 1032 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
RPAP1-212ENST00000569829 SWAP70Q9UH65 585 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 GRIN2DO15399 1336 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 DNAJC25-GNG10A0A024R161 153 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 CD4P01730 458 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 SPRED2Q7Z698 418 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 TMEM199Q8N511 208 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 HERVK_113Q902F9 699 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 SCLYQ96I15 445 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 HAUS7Q99871 368 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 KATNBL1Q9H079 304 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 WNT8AQ9H1J5 351 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
RPAP1-212ENST00000569829 IL23AQ9NPF7 189 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 MSRAQ9UJ68 235 aa12.16□□□□□ -0.46
RPAP1-212ENST00000569829 ELP1O95163 1332 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 A0A0U1RQG5 324 aaPredicted RBP12.15□□□□□ -0.46
RPAP1-212ENST00000569829 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 FGBP02675 491 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 CST5P28325 142 aaPredicted RBP12.15□□□□□ -0.46
RPAP1-212ENST00000569829 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
RPAP1-212ENST00000569829 GJA9P57773 515 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 PSMC6P62333 389 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 PSRC1Q6PGN9 363 aaPredicted RBP12.15□□□□□ -0.46
RPAP1-212ENST00000569829 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 TRPV6Q9H1D0 765 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 SLC28A3Q9HAS3 691 aa12.15□□□□□ -0.46
RPAP1-212ENST00000569829 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 ADD2P35612 726 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 SKIV2LQ15477 1246 aaKnown RBP12.14□□□□□ -0.47
RPAP1-212ENST00000569829 RAB30Q15771 203 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 PPP2R2DQ66LE6 453 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 ARMCX2Q7L311 632 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 SLF1Q9BQI6 1058 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 LRFN3Q9BTN0 628 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 UPF3AQ9H1J1 476 aaKnown RBP12.14□□□□□ -0.47
RPAP1-212ENST00000569829 BOLA2Q9H3K6 86 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 PAG1Q9NWQ8 432 aa12.14□□□□□ -0.47
RPAP1-212ENST00000569829 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 F5H6K3 240 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 NDUFB10O96000 172 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 KLRC3Q07444 240 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 CTR9Q6PD62 1173 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 PCSK9Q8NBP7 692 aaKnown RBP12.13□□□□□ -0.47
RPAP1-212ENST00000569829 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
RPAP1-212ENST00000569829 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 PDGFCQ9NRA1 345 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 PCDHB15Q9Y5E8 787 aa12.13□□□□□ -0.47
RPAP1-212ENST00000569829 MROH7Q68CQ1 1323 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 GREB1LQ9C091 1923 aaPredicted RBP12.12□□□□□ -0.47
RPAP1-212ENST00000569829 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 B4GALT4O60513 344 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 UBE3CQ15386 1083 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 EEPD1Q7L9B9 569 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
RPAP1-212ENST00000569829 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
RPAP1-212ENST00000569829 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 C11orf16Q9NQ32 467 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
RPAP1-212ENST00000569829 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
RPAP1-212ENST00000569829 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-212ENST00000569829 CA3P07451 260 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 CYP2C9P11712 490 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 RASA1P20936 1047 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 SNAP25P60880 206 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 ITGA7Q13683 1181 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
RPAP1-212ENST00000569829 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms