RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 TMEM39AQ9NV64 488 aa18.28■□□□□ 0.52
SCAMP2-210ENST00000569124 VCANP13611 3396 aa18.28■□□□□ 0.52
SCAMP2-210ENST00000569124 SYNGAP1Q96PV0 1343 aa18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 ITGB8P26012 769 aa18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 SNRNP48Q6IEG0 339 aaKnown RBP18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 NUP133Q8WUM0 1156 aa18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 DDX11Q96FC9 970 aa18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 CTDP1Q9Y5B0 961 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-210ENST00000569124 TTC28Q96AY4 2481 aa18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 MOXD2PA6NHM9 499 aa18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 DCDC2CA8MYV0 355 aa18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 ACLYP53396 1101 aa18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 NUP88Q99567 741 aaPredicted RBP18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 UPF2Q9HAU5 1272 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
SCAMP2-210ENST00000569124 MROH7Q68CQ1 1323 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 HSPD1P10809 573 aaKnown RBP18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 TDO2P48775 406 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 EPHB4P54760 987 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 ANKRD33Q7Z3H0 272 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 TOX2Q96NM4 488 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 IL25Q9H293 177 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 LAMA4Q16363 1823 aa18.25■□□□□ 0.51
SCAMP2-210ENST00000569124 NDUFB10O96000 172 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 RASA1P20936 1047 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 SBK1Q52WX2 424 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 PRPF38AQ8NAV1 312 aaKnown RBP18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 GLT1D1Q96MS3 346 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 NAPBQ9H115 298 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 NYAP2Q9P242 653 aa18.24■□□□□ 0.51
SCAMP2-210ENST00000569124 MINDY4BA8MYZ0 360 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 F5H6K3 240 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 ZBED4O75132 1171 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 DUSP11O75319 330 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 DNAJB2P25686 324 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 KLRC3Q07444 240 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 FAAP100Q0VG06 881 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 KCNA10Q16322 511 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 CPXCR1Q8N123 301 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 KLHDC9Q8NEP7 349 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 BACH2Q9BYV9 841 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 SPC25Q9HBM1 224 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 CTNNA3Q9UI47 895 aa18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
SCAMP2-210ENST00000569124 NCOR1O75376 2440 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 GSG1L2A8MUP6 293 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 ATP2A1O14983 1001 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 C6orf222P0C671 652 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 MCCP23508 829 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 CST5P28325 142 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 VPS53Q5VIR6 699 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 IFNL3Q8IZI9 196 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 KIFC2Q96AC6 838 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 ZNF287Q9HBT7 754 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 FBXO40Q9UH90 709 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 RIPK3Q9Y572 518 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
SCAMP2-210ENST00000569124 MYH6P13533 1939 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 TIMP1P01033 207 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 PTH1RQ03431 593 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 ANKRD35Q8N283 1001 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 ABHD16BQ9H3Z7 469 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 CLIP2Q9UDT6 1046 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 TBX21Q9UL17 535 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 ELP1O95163 1332 aa18.21■□□□□ 0.51
SCAMP2-210ENST00000569124 PPIGQ13427 754 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 ACVR2BQ13705 512 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 ALX1Q15699 326 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 CCSAPQ6IQ19 270 aaPredicted RBP18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 MAP4K1Q92918 833 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 VTI1AQ96AJ9 217 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 TIFAQ96CG3 184 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 SLC38A10Q9HBR0 1119 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 RAVER2Q9HCJ3 691 aaKnown RBP18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 SCN5AQ14524 2016 aa18.2■□□□□ 0.5
SCAMP2-210ENST00000569124 PLIN4Q96Q06 1357 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms