RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NFE2L3Q9Y4A8 694 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 GRIPAP1Q4V328 841 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 JMJD4Q9H9V9 463 aa20.55■□□□□ 0.88
SMPD3-211ENST00000568373 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 FAM196BA6NMK8 535 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 CDC25AP30304 524 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 LETM2Q2VYF4 491 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 CERKLQ49MI3 558 aaPredicted RBP20.54■□□□□ 0.88
SMPD3-211ENST00000568373 ADGRF4Q8IZF3 695 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 MTRQ99707 1265 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 PSME4Q14997 1843 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 GTPBP6O43824 516 aaPredicted RBP20.54■□□□□ 0.88
SMPD3-211ENST00000568373 CCNT1O60563 726 aaKnown RBP20.54■□□□□ 0.88
SMPD3-211ENST00000568373 ZNF18P17022 549 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 R3HDM1Q15032 1099 aaKnown RBP20.54■□□□□ 0.88
SMPD3-211ENST00000568373 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 PPP1R18Q6NYC8 613 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 TATDN1Q6P1N9 297 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
SMPD3-211ENST00000568373 STAMQ92783 540 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 DPF2Q92785 391 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 COA7Q96BR5 231 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 MED15Q96RN5 788 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 DISC1Q9NRI5 854 aa20.54■□□□□ 0.88
SMPD3-211ENST00000568373 BIN2Q9UBW5 565 aaPredicted RBP20.54■□□□□ 0.88
SMPD3-211ENST00000568373 OR52Z1P0C646 297 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 SKILP12757 684 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 STAT6P42226 847 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 ADCY7P51828 1080 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 CCZ1BP86790 482 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 CCZ1P86791 482 aaPredicted RBP20.53■□□□□ 0.88
SMPD3-211ENST00000568373 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
SMPD3-211ENST00000568373 DHX8Q14562 1220 aaKnown RBP20.53■□□□□ 0.88
SMPD3-211ENST00000568373 KARSQ15046 597 aaKnown RBP20.53■□□□□ 0.88
SMPD3-211ENST00000568373 CFAP100Q494V2 611 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 JAKMIP3Q5VZ66 844 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 CCDC150Q8NCX0 1101 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 MKL1Q969V6 931 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 TDRD3Q9H7E2 651 aaKnown RBP20.53■□□□□ 0.88
SMPD3-211ENST00000568373 KANSL2Q9H9L4 492 aa20.53■□□□□ 0.88
SMPD3-211ENST00000568373 ATRNL1Q5VV63 1379 aa20.52■□□□□ 0.88
SMPD3-211ENST00000568373 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.88
SMPD3-211ENST00000568373 TPM2P07951 284 aa20.52■□□□□ 0.88
SMPD3-211ENST00000568373 CCDC93Q567U6 631 aa20.52■□□□□ 0.88
SMPD3-211ENST00000568373 CCSER1Q9C0I3 900 aa20.52■□□□□ 0.88
SMPD3-211ENST00000568373 NYAP2Q9P242 653 aa20.52■□□□□ 0.88
SMPD3-211ENST00000568373 ENTPD3O75355 529 aa20.52■□□□□ 0.87
SMPD3-211ENST00000568373 UBA7P41226 1012 aa20.52■□□□□ 0.87
SMPD3-211ENST00000568373 KCTD1Q719H9 257 aa20.52■□□□□ 0.87
SMPD3-211ENST00000568373 AK8Q96MA6 479 aa20.52■□□□□ 0.87
SMPD3-211ENST00000568373 BLZF1Q9H2G9 400 aa20.52■□□□□ 0.87
SMPD3-211ENST00000568373 TMEM260Q9NX78 707 aa20.52■□□□□ 0.87
SMPD3-211ENST00000568373 PP2D1A8MPX8 630 aa20.51■□□□□ 0.87
SMPD3-211ENST00000568373 EEF2P13639 858 aaKnown RBP20.51■□□□□ 0.87
SMPD3-211ENST00000568373 CD44P16070 742 aaKnown RBP20.51■□□□□ 0.87
SMPD3-211ENST00000568373 CUL4BQ13620 913 aa20.51■□□□□ 0.87
SMPD3-211ENST00000568373 SHROOM1Q2M3G4 852 aaPredicted RBP20.51■□□□□ 0.87
SMPD3-211ENST00000568373 RTKN2Q8IZC4 609 aa20.51■□□□□ 0.87
SMPD3-211ENST00000568373 MTMR8Q96EF0 704 aa20.51■□□□□ 0.87
SMPD3-211ENST00000568373 PRMT6Q96LA8 375 aaPredicted RBP20.51■□□□□ 0.87
SMPD3-211ENST00000568373 PPP1R11O60927 126 aaPredicted RBP20.5■□□□□ 0.87
SMPD3-211ENST00000568373 SLC16A2P36021 539 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 PSMD1Q99460 953 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
SMPD3-211ENST00000568373 UTRNP46939 3433 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 COL2A1P02458 1487 aaPredicted RBP20.5■□□□□ 0.87
SMPD3-211ENST00000568373 PPP1R3GB7ZBB8 358 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 ZBTB5O15062 677 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 NAALADL2Q58DX5 795 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 ARMCX5Q6P1M9 558 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 VSTM4Q8IW00 320 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 RASSF8Q8NHQ8 419 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 RIC8AQ9NPQ8 531 aa20.5■□□□□ 0.87
SMPD3-211ENST00000568373 SYNRGQ9UMZ2 1314 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 USP17L10C9JJH3 530 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 CDK11BP21127 795 aaKnown RBP20.49■□□□□ 0.87
SMPD3-211ENST00000568373 SFPQP23246 707 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMPD3-211ENST00000568373 HSP90AA4PQ58FG1 418 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 KLHL10Q6JEL2 608 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 SMYD4Q8IYR2 804 aaPredicted RBP20.49■□□□□ 0.87
SMPD3-211ENST00000568373 DCAF4Q8WV16 495 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 INTS13Q9NVM9 706 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 ZBTB7AO95365 584 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 SEPT2Q15019 361 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 SPATA1Q5VX52 437 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
SMPD3-211ENST00000568373 SAMSN1Q9NSI8 373 aaKnown RBP20.49■□□□□ 0.87
SMPD3-211ENST00000568373 RMND1Q9NWS8 449 aa20.49■□□□□ 0.87
SMPD3-211ENST00000568373 SLC1A4P43007 532 aa20.48■□□□□ 0.87
SMPD3-211ENST00000568373 ICA1Q05084 483 aa20.48■□□□□ 0.87
SMPD3-211ENST00000568373 SIAH1Q8IUQ4 282 aa20.48■□□□□ 0.87
SMPD3-211ENST00000568373 PRIMPOLQ96LW4 560 aa20.48■□□□□ 0.87
SMPD3-211ENST00000568373 TMEM232C9JQI7 657 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 RPN1P04843 607 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms