RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 RTP1P59025 263 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 LRRC41Q15345 812 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 RRP12Q5JTH9 1297 aaKnown RBP15.2■□□□□ 0.02
TSC2-220ENST00000568238 KCTD1Q719H9 257 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 ANKRD35Q8N283 1001 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 STAG1Q8WVM7 1258 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 XPNPEP3Q9NQH7 507 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 HOMER2Q9NSB8 354 aa15.2■□□□□ 0.02
TSC2-220ENST00000568238 PLA2G6O60733 806 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 ZNF865P0CJ78 1059 aaPredicted RBP15.19■□□□□ 0.02
TSC2-220ENST00000568238 NOVP48745 357 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 HAND2P61296 217 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 CCDC96Q2M329 555 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 RASGRP2Q7LDG7 609 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 ZNF467Q7Z7K2 595 aaPredicted RBP15.19■□□□□ 0.02
TSC2-220ENST00000568238 ACAD9Q9H845 621 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 ZHX1Q9UKY1 873 aaPredicted RBP15.19■□□□□ 0.02
TSC2-220ENST00000568238 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 LCTP09848 1927 aa15.19■□□□□ 0.02
TSC2-220ENST00000568238 HIP1O00291 1037 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
TSC2-220ENST00000568238 RCSD1Q6JBY9 416 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
TSC2-220ENST00000568238 MAMDC4Q6UXC1 1216 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 RNF180Q86T96 592 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 LENG1Q96BZ8 264 aaPredicted RBP15.18■□□□□ 0.02
TSC2-220ENST00000568238 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
TSC2-220ENST00000568238 RNF146Q9NTX7 359 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 PRKAG2Q9UGJ0 569 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 ATP11BQ9Y2G3 1177 aa15.18■□□□□ 0.02
TSC2-220ENST00000568238 ZNF536O15090 1300 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 SNAI1O95863 264 aaPredicted RBP15.17■□□□□ 0.02
TSC2-220ENST00000568238 PGK1P00558 417 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 TOP1P11387 765 aaKnown RBP15.17■□□□□ 0.02
TSC2-220ENST00000568238 ADCYAP1R1P41586 468 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
TSC2-220ENST00000568238 SNX17Q15036 470 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 TKFCQ3LXA3 575 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 AKNAD1Q5T1N1 836 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 CCDC174Q6PII3 467 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 SLC39A5Q6ZMH5 540 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 MFSD6Q6ZSS7 791 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 TBC1D10CQ8IV04 446 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 TDHQ8IZJ6 230 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 FGD4Q96M96 766 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 AGBL1Q96MI9 1066 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
TSC2-220ENST00000568238 PRR12Q9ULL5 1215 aa15.17■□□□□ 0.02
TSC2-220ENST00000568238 SOX1O00570 391 aaPredicted RBP15.16■□□□□ 0.02
TSC2-220ENST00000568238 CHMLP26374 656 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 FERMT2Q96AC1 680 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 TRERF1Q96PN7 1200 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 LBHD1Q9BQE6 289 aaPredicted RBP15.16■□□□□ 0.02
TSC2-220ENST00000568238 TMEM47Q9BQJ4 181 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 A1CFQ9NQ94 594 aaKnown RBP15.16■□□□□ 0.02
TSC2-220ENST00000568238 TCP11L1Q9NUJ3 509 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
TSC2-220ENST00000568238 FAM184BQ9ULE4 1060 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 PHF24Q9UPV7 400 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 NEDD4P46934 1319 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 SYNRGQ9UMZ2 1314 aa15.16■□□□□ 0.02
TSC2-220ENST00000568238 POTEB2H3BUK9 544 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 ADAMTS4O75173 837 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 ALAS1P13196 640 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 SNAP25P60880 206 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 ACVR2BQ13705 512 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 C1orf53Q5VUE5 145 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 ARMCX2Q7L311 632 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 ABHD16BQ9H3Z7 469 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 PRDM5Q9NQX1 630 aaPredicted RBP15.15■□□□□ 0.02
TSC2-220ENST00000568238 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
TSC2-220ENST00000568238 A0A1W2PQ45 241 aaPredicted RBP15.14■□□□□ 0.01
TSC2-220ENST00000568238 A0A1W2PQY0 241 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 ZNF213O14771 459 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 CNTN2Q02246 1040 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 LRIT3Q3SXY7 679 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 SYDE2Q5VT97 1194 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 CCDC144CPQ8IYA2 1237 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 ESR2Q92731 530 aa15.14■□□□□ 0.01
TSC2-220ENST00000568238 RANBP17Q9H2T7 1088 aaKnown RBP15.14■□□□□ 0.01
TSC2-220ENST00000568238 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
TSC2-220ENST00000568238 MYH6P13533 1939 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 DUSP11O75319 330 aaKnown RBP15.13■□□□□ 0.01
TSC2-220ENST00000568238 ICAM1P05362 532 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 PDHBP11177 359 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 SLC16A2P36021 539 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 NT5C2P49902 561 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 CCDC144BQ3MJ40 725 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 BTNL9Q6UXG8 535 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 TTC14Q96N46 770 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 TSEN34Q9BSV6 310 aaKnown RBP15.13■□□□□ 0.01
TSC2-220ENST00000568238 IL25Q9H293 177 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 GPCPD1Q9NPB8 672 aa15.13■□□□□ 0.01
TSC2-220ENST00000568238 PDLIM7Q9NR12 457 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms