RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 UBN2Q6ZU65 1347 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 VIRMAQ69YN4 1812 aaKnown RBP7.41□□□□□ -1.22
CAPN3-218ENST00000568153 A0A0A0MRY4 1105 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 HIP1O00291 1037 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 NTSR2O95665 410 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 APBA3O96018 575 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 METTL24Q5JXM2 366 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 CCDC158Q5M9N0 1113 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 GORABQ5T7V8 394 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 TBC1D9BQ66K14 1250 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-218ENST00000568153 SMIM5Q71RC9 77 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 EPS8L3Q8TE67 593 aaKnown RBP7.41□□□□□ -1.22
CAPN3-218ENST00000568153 MPHOSPH8Q99549 860 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 POP1Q99575 1024 aaKnown RBP7.41□□□□□ -1.22
CAPN3-218ENST00000568153 BOLA2Q9H3K6 86 aa7.41□□□□□ -1.22
CAPN3-218ENST00000568153 SRP68Q9UHB9 627 aaKnown RBP7.41□□□□□ -1.22
CAPN3-218ENST00000568153 A0A1W2PP55 124 aa7.4□□□□□ -1.22
CAPN3-218ENST00000568153 EPB41L2O43491 1005 aaKnown RBP7.4□□□□□ -1.22
CAPN3-218ENST00000568153 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
CAPN3-218ENST00000568153 IGHMBP2P38935 993 aaKnown RBP7.4□□□□□ -1.22
CAPN3-218ENST00000568153 SF3B3Q15393 1217 aaKnown RBP7.4□□□□□ -1.22
CAPN3-218ENST00000568153 TXNRD1Q16881 649 aa7.4□□□□□ -1.22
CAPN3-218ENST00000568153 PI16Q6UXB8 463 aa7.4□□□□□ -1.22
CAPN3-218ENST00000568153 KIAA1211Q6ZU35 1233 aa7.4□□□□□ -1.22
CAPN3-218ENST00000568153 NBPF5PQ86XG9 351 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-218ENST00000568153 TICAM2Q86XR7 235 aa7.4□□□□□ -1.22
CAPN3-218ENST00000568153 DBNDD2Q9BQY9 259 aa7.4□□□□□ -1.22
CAPN3-218ENST00000568153 ITGB4P16144 1822 aa7.4□□□□□ -1.23
CAPN3-218ENST00000568153 MROH5Q6ZUA9 1318 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 A0A1B0GUL7 405 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 PDE2AO00408 941 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-218ENST00000568153 NPHP1O15259 732 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 PDE8BO95263 885 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 MCCP23508 829 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 BAG6P46379 1132 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 COL19A1Q14993 1142 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 KIAA0319Q5VV43 1072 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 MSL1Q68DK7 614 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 TMEM102Q8N9M5 508 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-218ENST00000568153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.39□□□□□ -1.23
CAPN3-218ENST00000568153 NXPE3Q969Y0 559 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 CDC5LQ99459 802 aaKnown RBP7.39□□□□□ -1.23
CAPN3-218ENST00000568153 HAUS7Q99871 368 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 LACRTQ9GZZ8 138 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 SEC31BQ9NQW1 1179 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 DIAPH3Q9NSV4 1193 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 DBNLQ9UJU6 430 aaKnown RBP7.39□□□□□ -1.23
CAPN3-218ENST00000568153 KAT6BQ8WYB5 2073 aa7.39□□□□□ -1.23
CAPN3-218ENST00000568153 LAMB4A4D0S4 1761 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.38□□□□□ -1.23
CAPN3-218ENST00000568153 THSD7AQ9UPZ6 1657 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 SGSM2O43147 1006 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 LDHBP07195 334 aaKnown RBP7.38□□□□□ -1.23
CAPN3-218ENST00000568153 IFIT1P09914 478 aaKnown RBP7.38□□□□□ -1.23
CAPN3-218ENST00000568153 ERCC3P19447 782 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 TTC39AQ5SRH9 613 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 CWC27Q6UX04 472 aaKnown RBP7.38□□□□□ -1.23
CAPN3-218ENST00000568153 ANKRD18AQ8IVF6 992 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 DMRTC2Q8IXT2 367 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-218ENST00000568153 IL22RA1Q8N6P7 574 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 FLAD1Q8NFF5 587 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 LPIN2Q92539 896 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 TCF12Q99081 682 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 FSD1Q9BTV5 496 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 TFCP2L1Q9NZI6 479 aa7.38□□□□□ -1.23
CAPN3-218ENST00000568153 RGS17Q9UGC6 210 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-218ENST00000568153 METTL12A8MUP2 240 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 GADD45BO75293 160 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 ELNP15502 786 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 TM4SF1P30408 202 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 RPS8P62241 208 aaKnown RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 NFIXQ14938 502 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 PUM3Q15397 648 aaKnown RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 GRIK4Q16099 956 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 ATP2B3Q16720 1220 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 LRRFIP1Q32MZ4 808 aaKnown RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 FBXO33Q7Z6M2 555 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 AMIGO3Q86WK7 504 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 WFDC8Q8IUA0 241 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 FMR1NBQ8N0W7 255 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 SNX21Q969T3 373 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 ZNF512BQ96KM6 892 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 DNAJC2Q99543 621 aaKnown RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 BHLHE41Q9C0J9 482 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 EHD4Q9H223 541 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 LIN7BQ9HAP6 207 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 BSDC1Q9NW68 430 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-218ENST00000568153 DOT1LQ8TEK3 1739 aa7.37□□□□□ -1.23
CAPN3-218ENST00000568153 WNK3Q9BYP7 1800 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 RTL9Q8NET4 1388 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 UQCRFS1P1P0C7P4 283 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 GYS1P13807 737 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 SLC5A1P13866 664 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 SELPP16109 830 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 PTPRAP18433 802 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 FGFR2P21802 821 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 RAC1P63000 192 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms