RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 TAL1P17542 331 aaPredicted RBP29.59■■■□□ 2.33
FANCA-228ENST00000567943 SLC16A2P36021 539 aa29.59■■■□□ 2.33
FANCA-228ENST00000567943 ANO1Q5XXA6 986 aa29.59■■■□□ 2.33
FANCA-228ENST00000567943 CHST13Q8NET6 341 aa29.59■■■□□ 2.33
FANCA-228ENST00000567943 HOMER2Q9NSB8 354 aa29.59■■■□□ 2.33
FANCA-228ENST00000567943 ZSWIM5Q9P217 1185 aa29.59■■■□□ 2.33
FANCA-228ENST00000567943 SNHG28P0DPA3 235 aa29.58■■■□□ 2.33
FANCA-228ENST00000567943 NT5C2P49902 561 aa29.58■■■□□ 2.33
FANCA-228ENST00000567943 FRMPD2Q68DX3 1309 aaPredicted RBP29.58■■■□□ 2.33
FANCA-228ENST00000567943 U3KPZ7 1027 aaPredicted RBP29.58■■■□□ 2.33
FANCA-228ENST00000567943 CCDC174Q6PII3 467 aa29.57■■■□□ 2.32
FANCA-228ENST00000567943 DGKHQ86XP1 1220 aa29.57■■■□□ 2.32
FANCA-228ENST00000567943 DDX11Q96FC9 970 aa29.57■■■□□ 2.32
FANCA-228ENST00000567943 GPCPD1Q9NPB8 672 aa29.57■■■□□ 2.32
FANCA-228ENST00000567943 FBXO40Q9UH90 709 aa29.57■■■□□ 2.32
FANCA-228ENST00000567943 LCTP09848 1927 aa29.56■■■□□ 2.32
FANCA-228ENST00000567943 EVI5O60447 810 aa29.56■■■□□ 2.32
FANCA-228ENST00000567943 ANKS1AQ92625 1134 aa29.56■■■□□ 2.32
FANCA-228ENST00000567943 KRT23Q9C075 422 aa29.56■■■□□ 2.32
FANCA-228ENST00000567943 RANBP17Q9H2T7 1088 aaKnown RBP29.56■■■□□ 2.32
FANCA-228ENST00000567943 CNNM2Q9H8M5 875 aa29.56■■■□□ 2.32
FANCA-228ENST00000567943 SNAI1O95863 264 aaPredicted RBP29.55■■■□□ 2.32
FANCA-228ENST00000567943 ZNF865P0CJ78 1059 aaPredicted RBP29.55■■■□□ 2.32
FANCA-228ENST00000567943 ZNF543Q08ER8 600 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 SYDE2Q5VT97 1194 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 MAMDC4Q6UXC1 1216 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 IQCA1Q86XH1 822 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 ANKRD35Q8N283 1001 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 ENAHQ8N8S7 591 aaPredicted RBP29.55■■■□□ 2.32
FANCA-228ENST00000567943 ESYT1Q9BSJ8 1104 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 RNF146Q9NTX7 359 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 NRBP1Q9UHY1 535 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 COLQQ9Y215 455 aaPredicted RBP29.55■■■□□ 2.32
FANCA-228ENST00000567943 NR2E3Q9Y5X4 410 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 TAF6LQ9Y6J9 622 aa29.55■■■□□ 2.32
FANCA-228ENST00000567943 CYP21A2P08686 494 aa29.54■■■□□ 2.32
FANCA-228ENST00000567943 MUM1L1Q5H9M0 696 aa29.54■■■□□ 2.32
FANCA-228ENST00000567943 KIAA1211Q6ZU35 1233 aa29.54■■■□□ 2.32
FANCA-228ENST00000567943 MAP4K1Q92918 833 aa29.54■■■□□ 2.32
FANCA-228ENST00000567943 TRERF1Q96PN7 1200 aa29.54■■■□□ 2.32
FANCA-228ENST00000567943 ZSCAN10Q96SZ4 725 aaPredicted RBP29.54■■■□□ 2.32
FANCA-228ENST00000567943 ACAD9Q9H845 621 aa29.54■■■□□ 2.32
FANCA-228ENST00000567943 A1CFQ9NQ94 594 aaKnown RBP29.54■■■□□ 2.32
FANCA-228ENST00000567943 TRIOBPQ9H2D6 2365 aa29.53■■■□□ 2.32
FANCA-228ENST00000567943 ALAS1P13196 640 aa29.53■■■□□ 2.32
FANCA-228ENST00000567943 CCDC178Q5BJE1 867 aa29.53■■■□□ 2.32
FANCA-228ENST00000567943 ZNF467Q7Z7K2 595 aaPredicted RBP29.53■■■□□ 2.32
FANCA-228ENST00000567943 MSL3Q8N5Y2 521 aaKnown RBP29.53■■■□□ 2.32
FANCA-228ENST00000567943 SYNGAP1Q96PV0 1343 aa29.52■■■□□ 2.32
FANCA-228ENST00000567943 DNM1LO00429 736 aa29.52■■■□□ 2.32
FANCA-228ENST00000567943 ICAM1P05362 532 aa29.52■■■□□ 2.32
FANCA-228ENST00000567943 CNTN2Q02246 1040 aa29.52■■■□□ 2.32
FANCA-228ENST00000567943 TKFCQ3LXA3 575 aa29.52■■■□□ 2.32
FANCA-228ENST00000567943 HABP4Q5JVS0 413 aaKnown RBP29.52■■■□□ 2.32
FANCA-228ENST00000567943 FAM133AQ8N9E0 248 aa29.52■■■□□ 2.32
FANCA-228ENST00000567943 RBM8AQ9Y5S9 174 aaKnown RBP29.52■■■□□ 2.32
FANCA-228ENST00000567943 LRRC26Q2I0M4 334 aa29.51■■■□□ 2.31
FANCA-228ENST00000567943 GJC2Q5T442 439 aaPredicted RBP29.51■■■□□ 2.31
FANCA-228ENST00000567943 CYB5R4Q7L1T6 521 aa29.51■■■□□ 2.31
FANCA-228ENST00000567943 PNMA1Q8ND90 353 aa29.51■■■□□ 2.31
FANCA-228ENST00000567943 CCPG1Q9ULG6 757 aa29.51■■■□□ 2.31
FANCA-228ENST00000567943 ASTN1O14525 1302 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 TNKSO95271 1327 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 GOLGA8HP0CJ92 632 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 TRDNQ13061 729 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 C7orf61Q8IZ16 206 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 LENG1Q96BZ8 264 aaPredicted RBP29.5■■■□□ 2.31
FANCA-228ENST00000567943 LSG1Q9H089 658 aaKnown RBP29.5■■■□□ 2.31
FANCA-228ENST00000567943 PRO3102Q9H379 93 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 CPVLQ9H3G5 476 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 PPP4R2Q9NY27 417 aa29.5■■■□□ 2.31
FANCA-228ENST00000567943 SOWAHBA6NEL2 793 aa29.49■■■□□ 2.31
FANCA-228ENST00000567943 CHRDL2Q6WN34 429 aa29.49■■■□□ 2.31
FANCA-228ENST00000567943 UBAC1Q9BSL1 405 aa29.49■■■□□ 2.31
FANCA-228ENST00000567943 SENP6Q9GZR1 1112 aaPredicted RBP29.49■■■□□ 2.31
FANCA-228ENST00000567943 LAMA3Q16787 3333 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 SEC23AQ15436 765 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 ERICH6BQ5W0A0 696 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 ARRDC4Q8NCT1 418 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 KATNBL1Q9H079 304 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 KAT14Q9H8E8 782 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 PCDH10Q9P2E7 1040 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 CNPY2Q9Y2B0 182 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 SZT2Q5T011 3432 aa29.48■■■□□ 2.31
FANCA-228ENST00000567943 E7EWF7 191 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 POTEB2H3BUK9 544 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 CDC45O75419 566 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 LRRC41Q15345 812 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 STOX1Q6ZVD7 989 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 PURBQ96QR8 312 aaKnown RBP29.47■■■□□ 2.31
FANCA-228ENST00000567943 ANO2Q9NQ90 1003 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.47■■■□□ 2.31
FANCA-228ENST00000567943 CYP39A1Q9NYL5 469 aa29.47■■■□□ 2.31
FANCA-228ENST00000567943 DDX49Q9Y6V7 483 aaKnown RBP29.47■■■□□ 2.31
FANCA-228ENST00000567943 LRRC37A2A6NM11 1700 aa29.46■■■□□ 2.31
FANCA-228ENST00000567943 ADCY6O43306 1168 aa29.46■■■□□ 2.31
FANCA-228ENST00000567943 GPATCH4Q5T3I0 446 aaKnown RBP29.46■■■□□ 2.31
FANCA-228ENST00000567943 CASC1Q6TDU7 716 aa29.46■■■□□ 2.31
FANCA-228ENST00000567943 ARMCX2Q7L311 632 aa29.46■■■□□ 2.31
FANCA-228ENST00000567943 RALYLQ86SE5 291 aaKnown RBP29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms