RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 PAG1Q9NWQ8 432 aa6.86□□□□□ -1.31
CDH13-209ENST00000567109 NBPF26B4DH59 902 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 PPEF1O14829 653 aaPredicted RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 CDC25BP30305 580 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 NBPF10Q6P3W6 841 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 SESTD1Q86VW0 696 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 NBPF15Q8N660 670 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 TEKT1Q969V4 418 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 CAPZA3Q96KX2 299 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 ADPGKQ9BRR6 497 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 PIM2Q9P1W9 311 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 MGEA5O60502 916 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 CAPN2P17655 700 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 KCNJ6P48051 423 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 YWHAEP62258 255 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 BRAPQ7Z569 592 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 BICC1Q9H694 974 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 MRPL44Q9H9J2 332 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 TRIM75PA6NK02 468 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 ONECUT3O60422 494 aaPredicted RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 S100BP04271 92 aaPredicted RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 DLGAP5Q15398 846 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 NLRX1Q86UT6 975 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 CASQ2O14958 399 aaPredicted RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 ARHGAP6O43182 974 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 LUC7L3O95232 432 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 SUSD4Q5VX71 490 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 CPLX4Q7Z7G2 160 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 VCX3BQ9H321 246 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 DNAI1Q9UI46 699 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 PSDA5PKW4 1024 aaPredicted RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 SF3B3Q15393 1217 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 NCAPG2Q86XI2 1143 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 POMGNT1Q8WZA1 660 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 MRFAP1L1Q96HT8 127 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 CCDC42Q96M95 316 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 VCXQ9H320 206 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 SRP68Q9UHB9 627 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 CPSF3Q9UKF6 684 aaKnown RBP6.85□□□□□ -1.31
CDH13-209ENST00000567109 CITO14578 2027 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 TNFAIP3P21580 790 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 LETM2Q2VYF4 491 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 BSPRYQ5W0U4 402 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 EFCAB13Q8IY85 973 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 LRRC2Q9BYS8 371 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 NKIRAS1Q9NYS0 192 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 TSKSQ9UJT2 592 aa6.85□□□□□ -1.31
CDH13-209ENST00000567109 GRIN3BO60391 1043 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 ATP11AP98196 1134 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 EN1Q05925 392 aaPredicted RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 DALRD3Q5D0E6 543 aaKnown RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 DCAF15Q66K64 600 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 Q6ZUG5 572 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 TTC1Q99614 292 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 HAUS8Q9BT25 410 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 BSDC1Q9NW68 430 aaPredicted RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 MEGF6O75095 1541 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 ANKRD12Q6UB98 2062 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 I3L4J1 428 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 ATP5JP18859 108 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 TNNI1P19237 187 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 PRPSAP1Q14558 356 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 ELMOD1Q8N336 334 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 PRPF38AQ8NAV1 312 aaKnown RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 XAGE2Q96GT9 111 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 SPATA17Q96L03 361 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 GLT8D2Q9H1C3 349 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 PA2G4Q9UQ80 394 aaKnown RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 PRAMEF22A3QJZ6 481 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 VAV2P52735 878 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 POLA2Q14181 598 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 NFIXQ14938 502 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 GNPTABQ3T906 1256 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 CCDC62Q6P9F0 684 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 BAG5Q9UL15 447 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 TTF2Q9UNY4 1162 aaKnown RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 TNNQ9UQP3 1299 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 USP42Q9H9J4 1324 aaKnown RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 SORBS3O60504 671 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 BCRP11274 1271 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 SLC20A2Q08357 652 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 NCAPH2Q6IBW4 605 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 MYCT1Q8N699 235 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 RNF217Q8TC41 542 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 RSAD2Q8WXG1 361 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 SCYL1Q96KG9 808 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 SFMBT1Q9UHJ3 866 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 SLIT2O94813 1529 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 EFCAB8A8MWE9 144 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 OSBPP22059 807 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 PDE4DQ08499 809 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 CNNM4Q6P4Q7 775 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 APLFQ8IW19 511 aaPredicted RBP6.84□□□□□ -1.31
CDH13-209ENST00000567109 PPP4R1Q8TF05 950 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 DBNDD2Q9BQY9 259 aa6.84□□□□□ -1.31
CDH13-209ENST00000567109 TRAF5O00463 557 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms