RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-216ENST00000567071 WDR87Q6ZQQ6 2873 aa11.88□□□□□ -0.51
CAPN3-216ENST00000567071 FLT1P17948 1338 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 MED19A0JLT2 244 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-216ENST00000567071 H0Y858 1186 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 B4GALT4O60513 344 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 BAIAP3O94812 1187 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 NUBP1P53384 320 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 CERKLQ49MI3 558 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-216ENST00000567071 PABPC5Q96DU9 382 aaKnown RBP11.87□□□□□ -0.51
CAPN3-216ENST00000567071 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 TLR9Q9NR96 1032 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 SIP14410 1827 aa11.87□□□□□ -0.51
CAPN3-216ENST00000567071 SCN5AQ14524 2016 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ERVK-21P61565 698 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ACVR2BQ13705 512 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 NOL8Q76FK4 1167 aaKnown RBP11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ATG9AQ7Z3C6 839 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 SPRED2Q7Z698 418 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ZNF384Q8TF68 577 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 CNTNAP3BQ96NU0 1288 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 CNTNAP3Q9BZ76 1288 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ABHD16BQ9H3Z7 469 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN3-216ENST00000567071 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
CAPN3-216ENST00000567071 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
CAPN3-216ENST00000567071 COL4A6Q14031 1691 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 CIAO1O76071 339 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 ADORA1P30542 326 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 MVPQ14764 893 aaKnown RBP11.85□□□□□ -0.51
CAPN3-216ENST00000567071 CCDC144BQ3MJ40 725 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 ADSSL1Q8N142 457 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 RETREG2Q8NC44 543 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-216ENST00000567071 MRPL38Q96DV4 380 aaKnown RBP11.85□□□□□ -0.51
CAPN3-216ENST00000567071 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 TNKSO95271 1327 aa11.85□□□□□ -0.51
CAPN3-216ENST00000567071 MYH1P12882 1939 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 ZNF292O60281 2723 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 LCHNA4D1U4 455 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 NCK2O43639 380 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-216ENST00000567071 AVPR2P30518 371 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 BEX3Q00994 111 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 SMAD2Q15796 467 aaKnown RBP11.84□□□□□ -0.51
CAPN3-216ENST00000567071 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 MAMDC4Q6UXC1 1216 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 RIOX2Q8IUF8 465 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 AP5M1Q9H0R1 490 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
CAPN3-216ENST00000567071 ANKRD11Q6UB99 2663 aaPredicted RBP11.83□□□□□ -0.51
CAPN3-216ENST00000567071 STXBP3O00186 592 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 STAT3P40763 770 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 IL15P40933 162 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-216ENST00000567071 NBL1P41271 181 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 ZXDAP98168 799 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-216ENST00000567071 BANK1Q8NDB2 785 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 RAD9AQ99638 391 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-216ENST00000567071 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-216ENST00000567071 CLDND1Q9NY35 253 aa11.83□□□□□ -0.52
CAPN3-216ENST00000567071 MCM3APO60318 1980 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 VAMP4O75379 141 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 CYP2C9P11712 490 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 RFX5P48382 616 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-216ENST00000567071 VCPP55072 806 aaKnown RBP11.82□□□□□ -0.52
CAPN3-216ENST00000567071 SIGLEC14Q08ET2 396 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 FSCN1Q16658 493 aaKnown RBP11.82□□□□□ -0.52
CAPN3-216ENST00000567071 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-216ENST00000567071 SPATA5Q8NB90 893 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 SH2D4AQ9H788 454 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 AKAP2Q9Y2D5 859 aa11.82□□□□□ -0.52
CAPN3-216ENST00000567071 EP300Q09472 2414 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-216ENST00000567071 TANC1Q9C0D5 1861 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
CAPN3-216ENST00000567071 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-216ENST00000567071 PPP4CP60510 307 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 NKX3-2P78367 333 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 TNFAIP2Q03169 654 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 TTC6Q86TZ1 520 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 MAGEB6Q8N7X4 407 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 EHD4Q9H223 541 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms