RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SPDYE16A6NNV3 312 aaPredicted RBP19.47■□□□□ 0.71
CLN6-208ENST00000567060 GRM4Q14833 912 aa19.47■□□□□ 0.71
CLN6-208ENST00000567060 RABEP1Q15276 862 aa19.47■□□□□ 0.71
CLN6-208ENST00000567060 CTCFLQ8NI51 663 aaPredicted RBP19.47■□□□□ 0.71
CLN6-208ENST00000567060 DIS3LQ8TF46 1054 aaKnown RBP19.47■□□□□ 0.71
CLN6-208ENST00000567060 P2RX7Q99572 595 aaKnown RBP19.47■□□□□ 0.71
CLN6-208ENST00000567060 LZTS2Q9BRK4 669 aa19.47■□□□□ 0.71
CLN6-208ENST00000567060 MORF4L1Q9UBU8 362 aa19.47■□□□□ 0.71
CLN6-208ENST00000567060 UNC80Q8N2C7 3258 aa19.47■□□□□ 0.71
CLN6-208ENST00000567060 CUL9Q8IWT3 2517 aa19.46■□□□□ 0.71
CLN6-208ENST00000567060 TMEM232C9JQI7 657 aa19.46■□□□□ 0.71
CLN6-208ENST00000567060 OAZ1P54368 228 aa19.46■□□□□ 0.71
CLN6-208ENST00000567060 APOA5Q6Q788 366 aa19.46■□□□□ 0.71
CLN6-208ENST00000567060 ANKRD13CQ8N6S4 541 aa19.46■□□□□ 0.71
CLN6-208ENST00000567060 GDF15Q99988 308 aa19.46■□□□□ 0.71
CLN6-208ENST00000567060 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
CLN6-208ENST00000567060 RBM28Q9NW13 759 aaKnown RBP19.46■□□□□ 0.71
CLN6-208ENST00000567060 NID2Q14112 1375 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 A0A0G2JMZ2 1700 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 CCDC196A0A1B0GTZ2 297 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 PALM3A6NDB9 673 aaPredicted RBP19.45■□□□□ 0.7
CLN6-208ENST00000567060 COPB2P35606 906 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 CCNA1P78396 465 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 COL9A3Q14050 684 aaPredicted RBP19.45■□□□□ 0.7
CLN6-208ENST00000567060 KCTD1Q719H9 257 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 BRF1Q92994 677 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 TCEANC2Q96MN5 208 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 NUP88Q99567 741 aaPredicted RBP19.45■□□□□ 0.7
CLN6-208ENST00000567060 LRRC2Q9BYS8 371 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 ALPK3Q96L96 1907 aa19.45■□□□□ 0.7
CLN6-208ENST00000567060 LAMA2P24043 3122 aaKnown RBP19.44■□□□□ 0.7
CLN6-208ENST00000567060 ATP2A1O14983 1001 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 ZBTB43O43298 467 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 CPA1P15085 419 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 BMP8BP34820 402 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 NEK4P51957 841 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 IKQ13123 557 aaPredicted RBP19.44■□□□□ 0.7
CLN6-208ENST00000567060 NECAB2Q7Z6G3 386 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 CHMP4CQ96CF2 233 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 ZNF274Q96GC6 653 aaPredicted RBP19.44■□□□□ 0.7
CLN6-208ENST00000567060 KIF2CQ99661 725 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 SENP2Q9HC62 589 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 MAD2L2Q9UI95 211 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 GJD2Q9UKL4 321 aa19.44■□□□□ 0.7
CLN6-208ENST00000567060 ISY1Q9ULR0 285 aaKnown RBP19.44■□□□□ 0.7
CLN6-208ENST00000567060 KLF18A0A0U1RQI7 1052 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 VWA5AO00534 786 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 ZBED4O75132 1171 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 MNX1P50219 401 aaPredicted RBP19.43■□□□□ 0.7
CLN6-208ENST00000567060 TRAF1Q13077 416 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 TOB2Q14106 344 aaPredicted RBP19.43■□□□□ 0.7
CLN6-208ENST00000567060 SYDE2Q5VT97 1194 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 FANCBQ8NB91 859 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 GPRC5AQ8NFJ5 357 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 NUP133Q8WUM0 1156 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 COA7Q96BR5 231 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.43■□□□□ 0.74e-8■■■■□ 25.2
CLN6-208ENST00000567060 SLC38A10Q9HBR0 1119 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
CLN6-208ENST00000567060 MTMR7Q9Y216 660 aa19.43■□□□□ 0.7
CLN6-208ENST00000567060 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
CLN6-208ENST00000567060 KLRF2D3W0D1 207 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 ST18O60284 1047 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 TRIM32Q13049 653 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 SHCBP1Q8NEM2 672 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 KIFC2Q96AC6 838 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 ATG4CQ96DT6 458 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 FBXO28Q9NVF7 368 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 RBPJLQ9UBG7 517 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 PRR12Q9ULL5 1215 aa19.42■□□□□ 0.7
CLN6-208ENST00000567060 FRMPD2Q68DX3 1309 aaPredicted RBP19.42■□□□□ 0.7
CLN6-208ENST00000567060 SLC25A27O95847 323 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 ERVK-9P63128 1117 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 ERVK-24P63145 666 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 MICU3Q86XE3 530 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 SPZ1Q9BXG8 430 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 MAF1Q9H063 256 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 RANBP17Q9H2T7 1088 aaKnown RBP19.41■□□□□ 0.7
CLN6-208ENST00000567060 GPCPD1Q9NPB8 672 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 BRPF3Q9ULD4 1205 aa19.41■□□□□ 0.7
CLN6-208ENST00000567060 MCM2P49736 904 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 METAP2P50579 478 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLN6-208ENST00000567060 APOBRQ0VD83 1088 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 RTN1Q16799 776 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 C7orf61Q8IZ16 206 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 ANKLE1Q8NAG6 615 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 TEX13BQ9BXU2 312 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 RIOX1Q9H6W3 641 aa19.4■□□□□ 0.7
CLN6-208ENST00000567060 ZMYND8Q9ULU4 1186 aaPredicted RBP19.4■□□□□ 0.7
CLN6-208ENST00000567060 DNAH12Q6ZR08 3092 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 GOLGA8AA7E2F4 631 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 GOLGA8BA8MQT2 603 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.69
CLN6-208ENST00000567060 GOLGA8HP0CJ92 632 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 MAPK4P31152 587 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 AK2P54819 239 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 TTBK2Q6IQ55 1244 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 GPR153Q6NV75 609 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms