RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 DUSP11O75319 330 aaKnown RBP22.36■■□□□ 1.17
ABCA3-204ENST00000566200 CTDSPL2Q05D32 466 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 FAAP100Q0VG06 881 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 KCNA10Q16322 511 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 ANKRD33Q7Z3H0 272 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 IL17RBQ9NRM6 502 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 HOMER2Q9NSB8 354 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 FBXO40Q9UH90 709 aa22.36■■□□□ 1.17
ABCA3-204ENST00000566200 LCTP09848 1927 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 A0A0C4DFX4 3053 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 NMT2O60551 498 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 SLC3A2P08195 630 aaKnown RBP22.35■■□□□ 1.17
ABCA3-204ENST00000566200 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
ABCA3-204ENST00000566200 STAT2P52630 851 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 RRP1P56182 461 aaKnown RBP22.35■■□□□ 1.17
ABCA3-204ENST00000566200 CNTN2Q02246 1040 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 CCDC144BQ3MJ40 725 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 ARMCX2Q7L311 632 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 AGBL1Q96MI9 1066 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 UNC80Q8N2C7 3258 aa22.35■■□□□ 1.17
ABCA3-204ENST00000566200 MOXD2PA6NHM9 499 aa22.34■■□□□ 1.17
ABCA3-204ENST00000566200 MCCP23508 829 aa22.34■■□□□ 1.17
ABCA3-204ENST00000566200 CCDC144CPQ8IYA2 1237 aa22.34■■□□□ 1.17
ABCA3-204ENST00000566200 FAM133AQ8N9E0 248 aa22.34■■□□□ 1.17
ABCA3-204ENST00000566200 STAG1Q8WVM7 1258 aa22.34■■□□□ 1.17
ABCA3-204ENST00000566200 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
ABCA3-204ENST00000566200 ABHD16BQ9H3Z7 469 aa22.34■■□□□ 1.17
ABCA3-204ENST00000566200 A1CFQ9NQ94 594 aaKnown RBP22.34■■□□□ 1.17
ABCA3-204ENST00000566200 EYSQ5T1H1 3165 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 SOWAHBA6NEL2 793 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 CTAGE5O15320 804 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 FDX1P10109 184 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 NOVP48745 357 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 ZNF697Q5TEC3 545 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 KCTD1Q719H9 257 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 FAM160B2Q86V87 743 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 NUP133Q8WUM0 1156 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 TOX2Q96NM4 488 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 ACAD9Q9H845 621 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 ANAPC4Q9UJX5 808 aa22.33■■□□□ 1.17
ABCA3-204ENST00000566200 ASTN1O14525 1302 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 PLA2G6O60733 806 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 ASGR1P07306 291 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 C6orf222P0C671 652 aaPredicted RBP22.32■■□□□ 1.16
ABCA3-204ENST00000566200 RAG1P15918 1043 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 SLC1A4P43007 532 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 CDK7P50613 346 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 GJA9P57773 515 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 SNAP25P60880 206 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 SMAD3P84022 425 aaKnown RBP22.32■■□□□ 1.16
ABCA3-204ENST00000566200 ANKRD45Q5TZF3 282 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 CHURC1Q8WUH1 139 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 CRBNQ96SW2 442 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 TTYH1Q9H313 450 aaPredicted RBP22.32■■□□□ 1.16
ABCA3-204ENST00000566200 RNF146Q9NTX7 359 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 TMEM39AQ9NV64 488 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 ISY1Q9ULR0 285 aaKnown RBP22.32■■□□□ 1.16
ABCA3-204ENST00000566200 STX8Q9UNK0 236 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 DDX49Q9Y6V7 483 aaKnown RBP22.32■■□□□ 1.16
ABCA3-204ENST00000566200 CDH23Q9H251 3354 aa22.32■■□□□ 1.16
ABCA3-204ENST00000566200 TSPY2A6NKD2 308 aa22.31■■□□□ 1.16
ABCA3-204ENST00000566200 RCSD1Q6JBY9 416 aa22.31■■□□□ 1.16
ABCA3-204ENST00000566200 CDX2Q99626 313 aaPredicted RBP22.31■■□□□ 1.16
ABCA3-204ENST00000566200 SEMA6BQ9H3T3 888 aa22.31■■□□□ 1.16
ABCA3-204ENST00000566200 TBX21Q9UL17 535 aa22.31■■□□□ 1.16
ABCA3-204ENST00000566200 PRR12Q9ULL5 1215 aa22.31■■□□□ 1.16
ABCA3-204ENST00000566200 ELP1O95163 1332 aa22.31■■□□□ 1.16
ABCA3-204ENST00000566200 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.3■■□□□ 1.16
ABCA3-204ENST00000566200 FGRP09769 529 aa22.3■■□□□ 1.16
ABCA3-204ENST00000566200 PDE1AP54750 535 aa22.3■■□□□ 1.16
ABCA3-204ENST00000566200 NKX3-2P78367 333 aa22.3■■□□□ 1.16
ABCA3-204ENST00000566200 MUM1L1Q5H9M0 696 aa22.3■■□□□ 1.16
ABCA3-204ENST00000566200 EVI5LQ96CN4 794 aa22.3■■□□□ 1.16
ABCA3-204ENST00000566200 TRERF1Q96PN7 1200 aa22.3■■□□□ 1.16
ABCA3-204ENST00000566200 DCDC2CA8MYV0 355 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 PTGS1P23219 599 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 FPGSQ05932 587 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 IKQ13123 557 aaPredicted RBP22.29■■□□□ 1.16
ABCA3-204ENST00000566200 ALX1Q15699 326 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 CCDC174Q6PII3 467 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 RNPC3Q96LT9 517 aaKnown RBP22.29■■□□□ 1.16
ABCA3-204ENST00000566200 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 GLT1D1Q96MS3 346 aa22.29■■□□□ 1.16
ABCA3-204ENST00000566200 A0A0D9SFI3 127 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 ORC4O43929 436 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 RANBP6O60518 1105 aaKnown RBP22.28■■□□□ 1.16
ABCA3-204ENST00000566200 ALAS1P13196 640 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 HDAC1Q13547 482 aaPredicted RBP22.28■■□□□ 1.16
ABCA3-204ENST00000566200 TKFCQ3LXA3 575 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 GNASQ5JWF2 1037 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 PPP4R3BQ5MIZ7 849 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 PCSK9Q8NBP7 692 aaKnown RBP22.28■■□□□ 1.16
ABCA3-204ENST00000566200 HELLSQ9NRZ9 838 aa22.28■■□□□ 1.16
ABCA3-204ENST00000566200 TIMP1P01033 207 aa22.27■■□□□ 1.16
ABCA3-204ENST00000566200 BEX3Q00994 111 aa22.27■■□□□ 1.16
ABCA3-204ENST00000566200 TTBK2Q6IQ55 1244 aa22.27■■□□□ 1.16
ABCA3-204ENST00000566200 CYP39A1Q9NYL5 469 aa22.27■■□□□ 1.16
ABCA3-204ENST00000566200 MTMR7Q9Y216 660 aa22.27■■□□□ 1.16
ABCA3-204ENST00000566200 GNEQ9Y223 722 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms