RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 MYH8P13535 1937 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 C5orf42Q9H799 3197 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 CABYRO75952 493 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 TTC39AQ5SRH9 613 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 TMEM179Q6ZVK1 233 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 PRSS33Q8NF86 280 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 KATNBL1Q9H079 304 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 HDAC5Q9UQL6 1122 aa20.24■□□□□ 0.83
CLK3-217ENST00000566126 TET1Q8NFU7 2136 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 GRXCR2A6NFK2 248 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 MTX1Q13505 466 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 DDX11Q96FC9 970 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 ARHGEF10LQ9HCE6 1279 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 PPP1R9AQ9ULJ8 1098 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 RIPK3Q9Y572 518 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 ZNF536O15090 1300 aa20.23■□□□□ 0.83
CLK3-217ENST00000566126 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.22■□□□□ 0.83
CLK3-217ENST00000566126 LCHNA4D1U4 455 aa20.22■□□□□ 0.83
CLK3-217ENST00000566126 POLR3DP05423 398 aaPredicted RBP20.22■□□□□ 0.83
CLK3-217ENST00000566126 DBNDD2Q9BQY9 259 aa20.22■□□□□ 0.83
CLK3-217ENST00000566126 SEZ6LQ9BYH1 1024 aa20.22■□□□□ 0.83
CLK3-217ENST00000566126 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 ACTN1P12814 892 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 PSMC6P62333 389 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 ICA1Q05084 483 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 ARMCX2Q7L311 632 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 MAGEB6Q8N7X4 407 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 MFSD14AQ96MC6 490 aa20.21■□□□□ 0.83
CLK3-217ENST00000566126 ZFHX2Q9C0A1 2572 aaPredicted RBP20.21■□□□□ 0.83
CLK3-217ENST00000566126 TECTAO75443 2155 aa20.2■□□□□ 0.82
CLK3-217ENST00000566126 CYP2C9P11712 490 aa20.2■□□□□ 0.82
CLK3-217ENST00000566126 PTGS1P23219 599 aa20.2■□□□□ 0.82
CLK3-217ENST00000566126 CCDC158Q5M9N0 1113 aa20.2■□□□□ 0.82
CLK3-217ENST00000566126 SNRNP48Q6IEG0 339 aaKnown RBP20.2■□□□□ 0.82
CLK3-217ENST00000566126 ALDH8A1Q9H2A2 487 aaPredicted RBP20.2■□□□□ 0.82
CLK3-217ENST00000566126 SH2D4AQ9H788 454 aa20.2■□□□□ 0.82
CLK3-217ENST00000566126 GNEQ9Y223 722 aaKnown RBP20.2■□□□□ 0.82
CLK3-217ENST00000566126 TANC1Q9C0D5 1861 aa20.2■□□□□ 0.82
CLK3-217ENST00000566126 IDH1O75874 414 aaKnown RBP20.19■□□□□ 0.82
CLK3-217ENST00000566126 AKR1B1P15121 316 aa20.19■□□□□ 0.82
CLK3-217ENST00000566126 FSCN1Q16658 493 aaKnown RBP20.19■□□□□ 0.82
CLK3-217ENST00000566126 CCDC144CPQ8IYA2 1237 aa20.19■□□□□ 0.82
CLK3-217ENST00000566126 ZNF512BQ96KM6 892 aaPredicted RBP20.19■□□□□ 0.82
CLK3-217ENST00000566126 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
CLK3-217ENST00000566126 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
CLK3-217ENST00000566126 SUGCTQ9HAC7 445 aa20.19■□□□□ 0.82
CLK3-217ENST00000566126 TRMT13Q9NUP7 481 aaKnown RBP20.19■□□□□ 0.82
CLK3-217ENST00000566126 SIP14410 1827 aa20.18■□□□□ 0.82
CLK3-217ENST00000566126 TNFAIP2Q03169 654 aa20.18■□□□□ 0.82
CLK3-217ENST00000566126 ZP2Q05996 745 aa20.18■□□□□ 0.82
CLK3-217ENST00000566126 TLK2Q86UE8 772 aa20.18■□□□□ 0.82
CLK3-217ENST00000566126 NEK9Q8TD19 979 aa20.18■□□□□ 0.82
CLK3-217ENST00000566126 MYO15AQ9UKN7 3530 aa20.18■□□□□ 0.82
CLK3-217ENST00000566126 C19orf67A6NJJ6 358 aa20.17■□□□□ 0.82
CLK3-217ENST00000566126 PTPN5P54829 565 aa20.17■□□□□ 0.82
CLK3-217ENST00000566126 IER5LQ5T953 404 aa20.17■□□□□ 0.82
CLK3-217ENST00000566126 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.17■□□□□ 0.82
CLK3-217ENST00000566126 CYP2D6P10635 497 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLK3-217ENST00000566126 PUS10Q3MIT2 529 aaKnown RBP20.16■□□□□ 0.82
CLK3-217ENST00000566126 TNNI3KQ59H18 835 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 NOL8Q76FK4 1167 aaKnown RBP20.16■□□□□ 0.82
CLK3-217ENST00000566126 TMCO2Q7Z6W1 182 aaPredicted RBP20.16■□□□□ 0.82
CLK3-217ENST00000566126 DYNLL2Q96FJ2 89 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 GPR108Q9NPR9 543 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 MCM9Q9NXL9 1143 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 MTUS1Q9ULD2 1270 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 FPGT-TNNI3KV9GXZ4 949 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 DCHS1Q96JQ0 3298 aa20.16■□□□□ 0.82
CLK3-217ENST00000566126 H3BQ06 376 aaPredicted RBP20.15■□□□□ 0.82
CLK3-217ENST00000566126 EEF2P13639 858 aaKnown RBP20.15■□□□□ 0.82
CLK3-217ENST00000566126 RFC2P35250 354 aa20.15■□□□□ 0.82
CLK3-217ENST00000566126 TCF15Q12870 199 aa20.15■□□□□ 0.82
CLK3-217ENST00000566126 TNKSO95271 1327 aa20.15■□□□□ 0.82
CLK3-217ENST00000566126 DYNC1LI2O43237 492 aaPredicted RBP20.14■□□□□ 0.81
CLK3-217ENST00000566126 GFRA3O60609 400 aa20.14■□□□□ 0.81
CLK3-217ENST00000566126 SMPD1P17405 629 aa20.14■□□□□ 0.81
CLK3-217ENST00000566126 ALDH1L2Q3SY69 923 aa20.14■□□□□ 0.81
CLK3-217ENST00000566126 PNMA6EA0A0J9YXQ4 647 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 ZEB2O60315 1214 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 IQCF3P0C7M6 154 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 SUPT20HL2P0C7V6 817 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 ERVK-21P61565 698 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 TMEM63BQ5T3F8 832 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 ANKRD35Q8N283 1001 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 FTOQ9C0B1 505 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLK3-217ENST00000566126 AP5M1Q9H0R1 490 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 SMC4Q9NTJ3 1288 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 SWAP70Q9UH65 585 aa20.13■□□□□ 0.81
CLK3-217ENST00000566126 CACNA1HO95180 2353 aa20.12■□□□□ 0.81
CLK3-217ENST00000566126 ATP2A1O14983 1001 aa20.12■□□□□ 0.81
CLK3-217ENST00000566126 BAIAP3O94812 1187 aa20.12■□□□□ 0.81
CLK3-217ENST00000566126 IRS1P35568 1242 aa20.12■□□□□ 0.81
CLK3-217ENST00000566126 CNTN2Q02246 1040 aa20.12■□□□□ 0.81
CLK3-217ENST00000566126 SLF1Q9BQI6 1058 aa20.12■□□□□ 0.81
CLK3-217ENST00000566126 PRKAG3Q9UGI9 489 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms