RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CALM3P0DP25 149 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 RGS2P41220 211 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 SLC9C1Q4G0N8 1177 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 NFXL1Q6ZNB6 911 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 IL17RAQ96F46 866 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 LRRC2Q9BYS8 371 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 KIAA0100Q14667 2235 aaKnown RBP24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 HOXC6P09630 235 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 FCER1AP12319 257 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 CASTP20810 708 aaKnown RBP24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 RPS6KB1P23443 525 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 MAP2K5Q13163 448 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 TKFCQ3LXA3 575 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 CHST13Q8NET6 341 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 APBA2Q99767 749 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 FBXO40Q9UH90 709 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 RIPK3Q9Y572 518 aa24.56■■□□□ 1.52
SHCBP1-205ENST00000566016 RBBP6Q7Z6E9 1792 aaKnown RBP24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 KLRF2D3W0D1 207 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 GRK4P32298 578 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 KIF5BP33176 963 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 NBPF11Q86T75 865 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 STAG2Q8N3U4 1231 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 TCEANC2Q96MN5 208 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 AGXT2Q9BYV1 514 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 ZSWIM6Q9HCJ5 1215 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 SLC12A7Q9Y666 1083 aa24.55■■□□□ 1.52
SHCBP1-205ENST00000566016 BRCA2P51587 3418 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 ADCY3O60266 1144 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 SEC24BO95487 1268 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 ADORA2AP29274 412 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 RCAN1P53805 252 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 APOA5Q6Q788 366 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 TRMT44Q8IYL2 757 aaKnown RBP24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 ADGRF4Q8IZF3 695 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 CTCFLQ8NI51 663 aaPredicted RBP24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 UBA5Q9GZZ9 404 aa24.54■■□□□ 1.52
SHCBP1-205ENST00000566016 RUFY3Q7L099 469 aa24.53■■□□□ 1.52
SHCBP1-205ENST00000566016 AGBL1Q96MI9 1066 aa24.53■■□□□ 1.52
SHCBP1-205ENST00000566016 CCPG1Q9ULG6 757 aa24.53■■□□□ 1.52
SHCBP1-205ENST00000566016 KCTD2Q14681 263 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 CCDC174Q6PII3 467 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 NUP133Q8WUM0 1156 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 MTMR8Q96EF0 704 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 ZNF333Q96JL9 665 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 MMP19Q99542 508 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 CPVLQ9H3G5 476 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 ACAD9Q9H845 621 aa24.52■■□□□ 1.52
SHCBP1-205ENST00000566016 CPA1P15085 419 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 SMARCA1P28370 1054 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 GNAQP50148 359 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 FGD1P98174 961 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 CDC37Q16543 378 aaPredicted RBP24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 SYNE3Q6ZMZ3 975 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 MYL10Q9BUA6 226 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 RIOX1Q9H6W3 641 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 JMJD4Q9H9V9 463 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 SLC5A4Q9NY91 659 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 CYP46A1Q9Y6A2 500 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 CYP2B6P20813 491 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 SNAP25P60880 206 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 LZTS2Q9BRK4 669 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 SPZ1Q9BXG8 430 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 RNF146Q9NTX7 359 aa24.51■■□□□ 1.51
SHCBP1-205ENST00000566016 HMGCRP04035 888 aa24.5■■□□□ 1.51
SHCBP1-205ENST00000566016 ELNP15502 786 aa24.5■■□□□ 1.51
SHCBP1-205ENST00000566016 Q6ZUG5 572 aa24.5■■□□□ 1.51
SHCBP1-205ENST00000566016 SH3TC2Q8TF17 1288 aa24.5■■□□□ 1.51
SHCBP1-205ENST00000566016 TRERF1Q96PN7 1200 aa24.5■■□□□ 1.51
SHCBP1-205ENST00000566016 DNAJC25-GNG10A0A024R161 153 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 DHX16O60231 1041 aaKnown RBP24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 ALAS1P13196 640 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 DPP9Q86TI2 863 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 MICU3Q86XE3 530 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 FANCBQ8NB91 859 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 TRIB2Q92519 343 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 HOMER2Q9NSB8 354 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 BRPF3Q9ULD4 1205 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 DIS3Q9Y2L1 958 aaKnown RBP24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 LCTP09848 1927 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 NID2Q14112 1375 aa24.49■■□□□ 1.51
SHCBP1-205ENST00000566016 ZBTB43O43298 467 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 CYTH3O43739 400 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 IGHA2P01877 340 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 EVCP57679 992 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 PPP2R5BQ15173 497 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 SLC35G1Q2M3R5 365 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 QRICH1Q2TAL8 776 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 BRF1Q92994 677 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 MAF1Q9H063 256 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 PFASO15067 1338 aa24.48■■□□□ 1.51
SHCBP1-205ENST00000566016 KLF18A0A0U1RQI7 1052 aa24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 ZBTB5O15062 677 aa24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 COBLO75128 1261 aa24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 SLC4A3P48751 1232 aa24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 UBXN2AP68543 259 aa24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 OLFML2BQ68BL8 750 aa24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 UPF3BQ9BZI7 483 aaKnown RBP24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 RBM28Q9NW13 759 aaKnown RBP24.47■■□□□ 1.51
SHCBP1-205ENST00000566016 INHAP05111 366 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms