RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TOP1P11387 765 aaKnown RBP23.46■■□□□ 1.35
CLN6-206ENST00000565471 HAND2P61296 217 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 AKNAD1Q5T1N1 836 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 MFSD6Q6ZSS7 791 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 RNF180Q86T96 592 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 FGD4Q96M96 766 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 PRR12Q9ULL5 1215 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 PHF24Q9UPV7 400 aa23.46■■□□□ 1.35
CLN6-206ENST00000565471 ADCYAP1R1P41586 468 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 C1orf53Q5VUE5 145 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 CHMP4CQ96CF2 233 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 AGBL1Q96MI9 1066 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 TMEM47Q9BQJ4 181 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 UBE2OQ9C0C9 1292 aaKnown RBP23.45■■□□□ 1.34
CLN6-206ENST00000565471 RNF41Q9H4P4 317 aaPredicted RBP23.45■■□□□ 1.34
CLN6-206ENST00000565471 HOMER2Q9NSB8 354 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 DIAPH3Q9NSV4 1193 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 RNF146Q9NTX7 359 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 FAM184BQ9ULE4 1060 aa23.45■■□□□ 1.34
CLN6-206ENST00000565471 NT5C2P49902 561 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 CCDC96Q2M329 555 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 BTNL9Q6UXG8 535 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 RASGRP2Q7LDG7 609 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 TBC1D10CQ8IV04 446 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 TDHQ8IZJ6 230 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 TTC14Q96N46 770 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 ABHD16BQ9H3Z7 469 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 A1CFQ9NQ94 594 aaKnown RBP23.44■■□□□ 1.34
CLN6-206ENST00000565471 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.44■■□□□ 1.34
CLN6-206ENST00000565471 ATP11BQ9Y2G3 1177 aa23.44■■□□□ 1.34
CLN6-206ENST00000565471 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
CLN6-206ENST00000565471 SOX1O00570 391 aaPredicted RBP23.43■■□□□ 1.34
CLN6-206ENST00000565471 ADAMTS4O75173 837 aa23.43■■□□□ 1.34
CLN6-206ENST00000565471 PGK1P00558 417 aa23.43■■□□□ 1.34
CLN6-206ENST00000565471 CWC27Q6UX04 472 aaKnown RBP23.43■■□□□ 1.34
CLN6-206ENST00000565471 FAM133AQ8N9E0 248 aa23.43■■□□□ 1.34
CLN6-206ENST00000565471 PRKAG2Q9UGJ0 569 aa23.43■■□□□ 1.34
CLN6-206ENST00000565471 ZHX1Q9UKY1 873 aaPredicted RBP23.43■■□□□ 1.34
CLN6-206ENST00000565471 MTMR7Q9Y216 660 aa23.43■■□□□ 1.34
CLN6-206ENST00000565471 POTEB2H3BUK9 544 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 ALAS1P13196 640 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 MDM2Q00987 491 aaPredicted RBP23.42■■□□□ 1.34
CLN6-206ENST00000565471 ACVR2BQ13705 512 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 LRIT3Q3SXY7 679 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 CCDC174Q6PII3 467 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 ARMCX2Q7L311 632 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 FERMT2Q96AC1 680 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 LENG1Q96BZ8 264 aaPredicted RBP23.42■■□□□ 1.34
CLN6-206ENST00000565471 TRERF1Q96PN7 1200 aa23.42■■□□□ 1.34
CLN6-206ENST00000565471 LBHD1Q9BQE6 289 aaPredicted RBP23.42■■□□□ 1.34
CLN6-206ENST00000565471 TSEN34Q9BSV6 310 aaKnown RBP23.42■■□□□ 1.34
CLN6-206ENST00000565471 SYNRGQ9UMZ2 1314 aa23.41■■□□□ 1.34
CLN6-206ENST00000565471 ZNF213O14771 459 aa23.41■■□□□ 1.34
CLN6-206ENST00000565471 DUSP11O75319 330 aaKnown RBP23.41■■□□□ 1.34
CLN6-206ENST00000565471 ICAM1P05362 532 aa23.41■■□□□ 1.34
CLN6-206ENST00000565471 TRIM60Q495X7 471 aa23.41■■□□□ 1.34
CLN6-206ENST00000565471 ESR2Q92731 530 aa23.41■■□□□ 1.34
CLN6-206ENST00000565471 RANBP17Q9H2T7 1088 aaKnown RBP23.41■■□□□ 1.34
CLN6-206ENST00000565471 LTBP2Q14767 1821 aa23.4■■□□□ 1.34
CLN6-206ENST00000565471 MCM3APO60318 1980 aa23.4■■□□□ 1.34
CLN6-206ENST00000565471 CNTN2Q02246 1040 aa23.4■■□□□ 1.34
CLN6-206ENST00000565471 CCDC144CPQ8IYA2 1237 aa23.4■■□□□ 1.34
CLN6-206ENST00000565471 DSCC1Q9BVC3 393 aa23.4■■□□□ 1.34
CLN6-206ENST00000565471 CCPG1Q9ULG6 757 aa23.4■■□□□ 1.34
CLN6-206ENST00000565471 NEDD4P46934 1319 aa23.39■■□□□ 1.34
CLN6-206ENST00000565471 A0A1W2PQ45 241 aaPredicted RBP23.39■■□□□ 1.33
CLN6-206ENST00000565471 A0A1W2PQY0 241 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 PDHBP11177 359 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 SNAP25P60880 206 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 SYDE2Q5VT97 1194 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 TTBK2Q6IQ55 1244 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 GPR153Q6NV75 609 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 KLHDC9Q8NEP7 349 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 LRCH3Q96II8 777 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 KATNBL1Q9H079 304 aa23.39■■□□□ 1.33
CLN6-206ENST00000565471 SOWAHBA6NEL2 793 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 MOXD2PA6NHM9 499 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 ASB14A6NK59 587 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 SNHG28P0DPA3 235 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 CST5P28325 142 aaPredicted RBP23.38■■□□□ 1.33
CLN6-206ENST00000565471 SLC16A2P36021 539 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 CCDC144BQ3MJ40 725 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 MUM1L1Q5H9M0 696 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 CYP39A1Q9NYL5 469 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 PNMA2Q9UL42 364 aa23.38■■□□□ 1.33
CLN6-206ENST00000565471 FRMPD2Q68DX3 1309 aaPredicted RBP23.37■■□□□ 1.33
CLN6-206ENST00000565471 PDE4AP27815 886 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 ACLYP53396 1101 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 ZNF543Q08ER8 600 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 CCDC178Q5BJE1 867 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 CCSAPQ6IQ19 270 aaPredicted RBP23.37■■□□□ 1.33
CLN6-206ENST00000565471 UPF3AQ9H1J1 476 aaKnown RBP23.37■■□□□ 1.33
CLN6-206ENST00000565471 GPCPD1Q9NPB8 672 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 PDLIM7Q9NR12 457 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 CTNNA3Q9UI47 895 aa23.37■■□□□ 1.33
CLN6-206ENST00000565471 DNAH12Q6ZR08 3092 aa23.36■■□□□ 1.33
CLN6-206ENST00000565471 ADCY6O43306 1168 aa23.36■■□□□ 1.33
CLN6-206ENST00000565471 TLE2Q04725 743 aa23.36■■□□□ 1.33
CLN6-206ENST00000565471 TTC22Q5TAA0 569 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms