RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 TMOD4Q9NZQ9 345 aa14.53□□□□□ -0.08
NSMCE1-208ENST00000565070 ABT1Q9ULW3 272 aaKnown RBP14.53□□□□□ -0.08
NSMCE1-208ENST00000565070 KCNH4Q9UQ05 1017 aa14.53□□□□□ -0.08
NSMCE1-208ENST00000565070 CTAGE5O15320 804 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 NDUFB10O96000 172 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 SNHG28P0DPA3 235 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 PDHBP11177 359 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 SF3A1Q15459 793 aaKnown RBP14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 PKN1Q16512 942 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 SH3D19Q5HYK7 790 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 WNK4Q96J92 1243 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 C12orf42Q96LP6 360 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.08
NSMCE1-208ENST00000565070 WDR46O15213 610 aaKnown RBP14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 PPP6R2O75170 966 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 APLP1P51693 650 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 TYRO3Q06418 890 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 PTPAQ15257 358 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 AXDND1Q5T1B0 1012 aaPredicted RBP14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 RGMBQ6NW40 437 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 FMR1NBQ8N0W7 255 aaPredicted RBP14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 SHISA4Q96DD7 197 aa14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.09
NSMCE1-208ENST00000565070 LOC285556D6RIA3 1793 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 BTBD18B2RXH4 712 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 IRF6O14896 467 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 ZNF157P51786 506 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 AKAP17AQ02040 695 aaKnown RBP14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 ZYXQ15942 572 aaKnown RBP14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 CKAP2LQ8IYA6 745 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 TRIM44Q96DX7 344 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 KCNJ14Q9UNX9 436 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 MRVI1Q9Y6F6 885 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 CNTNAP5Q8WYK1 1306 aa14.51□□□□□ -0.09
NSMCE1-208ENST00000565070 A0A0G2JLL6 359 aaPredicted RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 BMP3P12645 472 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 XBP1P17861 261 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 GTF2A2P52657 109 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 HMGCS2P54868 508 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 SPRYD7Q5W111 196 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 FASTKD5Q7L8L6 764 aaKnown RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 PRRT2Q7Z6L0 340 aaPredicted RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 PALM3A6NDB9 673 aaPredicted RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 CETPP11597 493 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 CMA1P23946 247 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 SMARCA1P28370 1054 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 HS1BP3Q53T59 392 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 RILPL1Q5EBL4 403 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 SPICE1Q8N0Z3 855 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 SRBD1Q8N5C6 995 aaKnown RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 JMYQ8N9B5 988 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 PHF20Q9BVI0 1012 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 MAD2L2Q9UI95 211 aa14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 V9GY48 417 aaPredicted RBP14.5□□□□□ -0.09
NSMCE1-208ENST00000565070 KLRF2D3W0D1 207 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 PLA2G6O60733 806 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 VCAM1P19320 739 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 TOB1P50616 345 aaPredicted RBP14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 NDUFA8P51970 172 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 RASAL3Q86YV0 1011 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 STAG2Q8N3U4 1231 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 FAM200AQ8TCP9 573 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 CHURC1Q8WUH1 139 aa14.49□□□□□ -0.09
NSMCE1-208ENST00000565070 FAM237AA0A1B0GTK4 181 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 A0A1B0GVL5 298 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 CAVIN2O95810 425 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 SLC10A3P09131 477 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 GJA5P36382 358 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 STAT2P52630 851 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 PABPC4Q13310 644 aaKnown RBP eCLIP14.48□□□□□ -0.095e-7■■■■■ 43.2
NSMCE1-208ENST00000565070 FAM83BQ5T0W9 1011 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 SASS6Q6UVJ0 657 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 FAM160B2Q86V87 743 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 FEM1BQ9UK73 627 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 FRMPD2Q68DX3 1309 aaPredicted RBP14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 IKQ13123 557 aaPredicted RBP14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 SPZ1Q9BXG8 430 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 TANGO6Q9C0B7 1094 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 VPS54Q9P1Q0 977 aa14.48□□□□□ -0.09
NSMCE1-208ENST00000565070 MANSC4A6NHS7 340 aaPredicted RBP14.47□□□□□ -0.09
NSMCE1-208ENST00000565070 TMEM232C9JQI7 657 aa14.47□□□□□ -0.09
NSMCE1-208ENST00000565070 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
NSMCE1-208ENST00000565070 MARCKSP29966 332 aaPredicted RBP14.47□□□□□ -0.09
NSMCE1-208ENST00000565070 NR5A1Q13285 461 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms