RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DPF3Q92784 378 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 ZHX2Q9Y6X8 837 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 ADGRA2Q96PE1 1338 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-205ENST00000564899 USP17L10C9JJH3 530 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
SF3B3-205ENST00000564899 STX6O43752 255 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 BMP3P12645 472 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 FOSBP53539 338 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 SPP2Q13103 211 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 MTMR2Q13614 643 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 PKP1Q13835 747 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 ZNF280CQ8ND82 737 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 SLC17A8Q8NDX2 589 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-205ENST00000564899 SPZ1Q9BXG8 430 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 CPVLQ9H3G5 476 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-205ENST00000564899 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
SF3B3-205ENST00000564899 SPTBN5Q9NRC6 3674 aaKnown RBP12.82□□□□□ -0.36
SF3B3-205ENST00000564899 hCG_1642624A0A1W2PR95 340 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 TRIM75PA6NK02 468 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 H3BQV1 296 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 CYTH3O43739 400 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 PDIA4P13667 645 aaKnown RBP12.81□□□□□ -0.36
SF3B3-205ENST00000564899 OSBPP22059 807 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 SMARCA1P28370 1054 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 USP14P54578 494 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 KIAA1755Q5JYT7 1200 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 FAM83BQ5T0W9 1011 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 TTBK2Q6IQ55 1244 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 C17orf99Q6UX52 265 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 PIBF1Q8WXW3 757 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 LPAR1Q92633 364 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 C8orf76Q96K31 380 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 MYH4Q9Y623 1939 aa12.81□□□□□ -0.36
SF3B3-205ENST00000564899 TMEM232C9JQI7 657 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 BRD1O95696 1058 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 CCL5P13501 91 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 SLC16A2P36021 539 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 PSMC4P43686 418 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 BACE1P56817 501 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 IKQ13123 557 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-205ENST00000564899 MOGSQ13724 837 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 TRIM29Q14134 588 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
SF3B3-205ENST00000564899 AIFM3Q96NN9 605 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
SF3B3-205ENST00000564899 SRRDQ9UH36 339 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 AFG3L2Q9Y4W6 797 aa12.8□□□□□ -0.36
SF3B3-205ENST00000564899 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
SF3B3-205ENST00000564899 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-205ENST00000564899 CETPP11597 493 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 SCG2P13521 617 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 VCAM1P19320 739 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 GJA8P48165 433 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 HMGCS2P54868 508 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 GUCY1B3Q02153 619 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 PPATQ06203 517 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 PKN1Q16512 942 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 PFKFB3Q16875 520 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-205ENST00000564899 SYDE2Q5VT97 1194 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-205ENST00000564899 ADGRF4Q8IZF3 695 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 FOXD4L4Q8WXT5 416 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-205ENST00000564899 PIGSQ96S52 555 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 UNC93B1Q9H1C4 597 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 TMOD4Q9NZQ9 345 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 GABRQQ9UN88 632 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 ZDHHC9Q9Y397 364 aa12.79□□□□□ -0.36
SF3B3-205ENST00000564899 XBP1P17861 261 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 GRK4P32298 578 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 STAT2P52630 851 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 PRKCZQ05513 592 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 PPIL2Q13356 520 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 SNAPC2Q13487 334 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 BTNL9Q6UXG8 535 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 FAM160B2Q86V87 743 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 CHURC1Q8WUH1 139 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 JMJD4Q9H9V9 463 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
SF3B3-205ENST00000564899 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.36
SF3B3-205ENST00000564899 PDHXO00330 501 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 PLA2G6O60733 806 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms