RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 AMPD2Q01433 879 aa6.96□□□□□ -1.3
CDH1-207ENST00000564745 SCRN1Q12765 414 aa6.96□□□□□ -1.3
CDH1-207ENST00000564745 NTRK3Q16288 839 aa6.96□□□□□ -1.3
CDH1-207ENST00000564745 ZC3H12BQ5HYM0 836 aaKnown RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 TSPYL5Q86VY4 417 aaPredicted RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 DHX37Q8IY37 1157 aaKnown RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 CRACR2BQ8N4Y2 399 aaPredicted RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 C1orf159Q96HA4 380 aa6.96□□□□□ -1.3
CDH1-207ENST00000564745 FCRL3Q96P31 734 aaPredicted RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 METTL22Q9BUU2 404 aaPredicted RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
CDH1-207ENST00000564745 SEMA3GQ9NS98 782 aa6.96□□□□□ -1.3
CDH1-207ENST00000564745 ZC3H7BQ9UGR2 993 aaKnown RBP6.96□□□□□ -1.3
CDH1-207ENST00000564745 CYP26A1O43174 497 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 GSNP06396 782 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 TPP2P29144 1249 aaPredicted RBP6.95□□□□□ -1.3
CDH1-207ENST00000564745 PABPC4Q13310 644 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDH1-207ENST00000564745 FILIP1Q7Z7B0 1213 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 USHBP1Q8N6Y0 703 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 ZNF655Q8N720 491 aaPredicted RBP6.95□□□□□ -1.3
CDH1-207ENST00000564745 ENOX1Q8TC92 643 aaKnown RBP6.95□□□□□ -1.3
CDH1-207ENST00000564745 SLC12A9Q9BXP2 914 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 SLKQ9H2G2 1235 aaPredicted RBP6.95□□□□□ -1.3
CDH1-207ENST00000564745 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 CYP26B1Q9NR63 512 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 GPATCH2Q9NW75 528 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 IFT57Q9NWB7 429 aa6.95□□□□□ -1.3
CDH1-207ENST00000564745 ARNTLO00327 626 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 IRS4O14654 1257 aaPredicted RBP6.94□□□□□ -1.3
CDH1-207ENST00000564745 GSC2O15499 205 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 TGFB1P01137 390 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 SYPP08247 313 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 VAV1P15498 845 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 HOXC12P31275 282 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 MASP1P48740 699 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
CDH1-207ENST00000564745 POU4F1Q01851 419 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 GAB4Q2WGN9 574 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 SLC35F1Q5T1Q4 408 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 CWF19L1Q69YN2 538 aaKnown RBP6.94□□□□□ -1.3
CDH1-207ENST00000564745 KREMEN2Q8NCW0 462 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 SLC7A14Q8TBB6 771 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 IPO9Q96P70 1041 aaKnown RBP6.94□□□□□ -1.3
CDH1-207ENST00000564745 FOXP3Q9BZS1 431 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 MKNK2Q9HBH9 465 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 ATP13A1Q9HD20 1204 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 PIM2Q9P1W9 311 aa6.94□□□□□ -1.3
CDH1-207ENST00000564745 CCDC163A0A0D9SF12 145 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 PLD2O14939 933 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 AURKAO14965 403 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 FKTNO75072 461 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 SCG5P05408 212 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 THBDP07204 575 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 SDSP20132 328 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 BMP8BP34820 402 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 RTP2Q5QGT7 225 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 ZPBP2Q6X784 338 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 SYNPOQ8N3V7 929 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 NETO1Q8TDF5 533 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 FRS2Q8WU20 508 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 KCTD13Q8WZ19 329 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 COPS5Q92905 334 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 TRIT1Q9H3H1 467 aaKnown RBP6.93□□□□□ -1.3
CDH1-207ENST00000564745 SLC52A2Q9HAB3 445 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 TMEFF2Q9UIK5 374 aaPredicted RBP6.93□□□□□ -1.3
CDH1-207ENST00000564745 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
CDH1-207ENST00000564745 C2orf71A6NGG8 1288 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 ADAM23O75077 832 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 ESR1P03372 595 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 GSTM1P09488 218 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 FURINP09958 794 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 FOSL1P15407 271 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 NCLP19338 710 aaKnown RBP6.92□□□□□ -1.3
CDH1-207ENST00000564745 CD96P40200 585 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 CLCN7P51798 805 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 MAP4K2Q12851 820 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 IFI16Q16666 785 aaKnown RBP6.92□□□□□ -1.3
CDH1-207ENST00000564745 RNF187Q5TA31 235 aaPredicted RBP6.92□□□□□ -1.3
CDH1-207ENST00000564745 USP53Q70EK8 1073 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 NIM1KQ8IY84 436 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 NINJ1Q92982 152 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 NDOR1Q9UHB4 597 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 TRAF6Q9Y4K3 522 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 BACE2Q9Y5Z0 518 aa6.92□□□□□ -1.3
CDH1-207ENST00000564745 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 DNAJC6O75061 913 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 ZNF205O95201 554 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 PTPROQ16827 1216 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 FNDC3BQ53EP0 1204 aaKnown RBP6.91□□□□□ -1.3
CDH1-207ENST00000564745 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 KCNT2Q6UVM3 1135 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 FGD2Q7Z6J4 655 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 CREG2Q8IUH2 290 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
CDH1-207ENST00000564745 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms