RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TBX21Q9UL17 535 aa16.81■□□□□ 0.28
CDR2-204ENST00000564542 ADCY6O43306 1168 aa16.8■□□□□ 0.28
CDR2-204ENST00000564542 C6orf222P0C671 652 aaPredicted RBP16.8■□□□□ 0.28
CDR2-204ENST00000564542 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
CDR2-204ENST00000564542 ARMCX2Q7L311 632 aa16.8■□□□□ 0.28
CDR2-204ENST00000564542 LRRC47Q8N1G4 583 aaKnown RBP16.8■□□□□ 0.28
CDR2-204ENST00000564542 UPF3AQ9H1J1 476 aaKnown RBP16.8■□□□□ 0.28
CDR2-204ENST00000564542 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
CDR2-204ENST00000564542 LRRC37A2A6NM11 1700 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 PATL2C9JE40 543 aaKnown RBP16.79■□□□□ 0.28
CDR2-204ENST00000564542 APPP05067 770 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 ASGR1P07306 291 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 FDX1P10109 184 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 DNAJB2P25686 324 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 CDK7P50613 346 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 GJA9P57773 515 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
CDR2-204ENST00000564542 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 IFNL3Q8IZI9 196 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
CDR2-204ENST00000564542 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
CDR2-204ENST00000564542 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.78■□□□□ 0.28
CDR2-204ENST00000564542 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.78■□□□□ 0.28
CDR2-204ENST00000564542 TSPY3P0CV98 308 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 TSPY8P0CW00 308 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 BMP3P12645 472 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 IRX5P78411 483 aaPredicted RBP16.78■□□□□ 0.28
CDR2-204ENST00000564542 PDE4BQ07343 736 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 SLFN13Q68D06 897 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 KATNBL1Q9H079 304 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 ACAD9Q9H845 621 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 HOMER2Q9NSB8 354 aa16.78■□□□□ 0.28
CDR2-204ENST00000564542 STAT2P52630 851 aa16.77■□□□□ 0.28
CDR2-204ENST00000564542 NKX3-2P78367 333 aa16.77■□□□□ 0.28
CDR2-204ENST00000564542 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.285e-9■□□□□ 10
CDR2-204ENST00000564542 CCDC174Q6PII3 467 aa16.77■□□□□ 0.28
CDR2-204ENST00000564542 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.28
CDR2-204ENST00000564542 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.77■□□□□ 0.282e-16■□□□□ 8
CDR2-204ENST00000564542 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 TMEM232C9JQI7 657 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 ARVCFO00192 962 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 CTAGE5O15320 804 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
CDR2-204ENST00000564542 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 GNASQ5JWF2 1037 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 FAM160B2Q86V87 743 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 NAPBQ9H115 298 aa16.76■□□□□ 0.27
CDR2-204ENST00000564542 A1CFQ9NQ94 594 aaKnown RBP16.76■□□□□ 0.27
CDR2-204ENST00000564542 ZNF536O15090 1300 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 TFAP4Q01664 338 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 CNTN2Q02246 1040 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 PPARAQ07869 468 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 RASIP1Q5U651 963 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 TMEM199Q8N511 208 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 TIFAQ96CG3 184 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
CDR2-204ENST00000564542 ZNF576Q9H609 170 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 RNF146Q9NTX7 359 aa16.75■□□□□ 0.27
CDR2-204ENST00000564542 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
CDR2-204ENST00000564542 CHD9Q3L8U1 2897 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 ERC2O15083 957 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
CDR2-204ENST00000564542 PLA2G6O60733 806 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 CSF2RAP15509 400 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 SLC1A4P43007 532 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 TNFAIP2Q03169 654 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 IKQ13123 557 aaPredicted RBP16.74■□□□□ 0.27
CDR2-204ENST00000564542 TKFCQ3LXA3 575 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 TMEM240Q5SV17 173 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
CDR2-204ENST00000564542 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 PI4K2BQ8TCG2 481 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 STAG1Q8WVM7 1258 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 AGBL1Q96MI9 1066 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 FSD1Q9BTV5 496 aa16.74■□□□□ 0.27
CDR2-204ENST00000564542 ASTN1O14525 1302 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.73■□□□□ 0.27
CDR2-204ENST00000564542 SOWAHBA6NEL2 793 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 ASB14A6NK59 587 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 CD4P01730 458 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 TLK2Q86UE8 772 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 SYMPKQ92797 1274 aaKnown RBP16.73■□□□□ 0.27
CDR2-204ENST00000564542 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
CDR2-204ENST00000564542 GNEQ9Y223 722 aaKnown RBP16.73■□□□□ 0.27
CDR2-204ENST00000564542 CABYRO75952 493 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 MCCP23508 829 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 BEX3Q00994 111 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
CDR2-204ENST00000564542 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 SLC43A3Q8NBI5 491 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms