RNA–Protein interactions for RNA: ENST00000564131.1

RRN3-206, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 1 (best) BASIC

Gene RRN3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-206ENST00000564131 CCDC144BQ3MJ40 725 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
RRN3-206ENST00000564131 FAM126BQ8IXS8 530 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 ANKRD35Q8N283 1001 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 SLC43A3Q8NBI5 491 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
RRN3-206ENST00000564131 LRRCC1Q9C099 1032 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
RRN3-206ENST00000564131 ADCY6O43306 1168 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 RAD21O60216 631 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 CABYRO75952 493 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 TTLL1O95922 423 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 CD4P01730 458 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
RRN3-206ENST00000564131 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 CCDC129Q6ZRS4 1044 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 ARMCX2Q7L311 632 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 CPXCR1Q8N123 301 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
RRN3-206ENST00000564131 APPBP2Q92624 585 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 PBX4Q9BYU1 374 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 PLIN4Q96Q06 1357 aa12.92□□□□□ -0.34
RRN3-206ENST00000564131 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
RRN3-206ENST00000564131 PLA2G6O60733 806 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 CSF2RAP15509 400 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 ZNF444Q8N0Y2 327 aaPredicted RBP12.91□□□□□ -0.34
RRN3-206ENST00000564131 FAM133AQ8N9E0 248 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 HERVK_113Q902F9 699 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 CEP95Q96GE4 821 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
RRN3-206ENST00000564131 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
RRN3-206ENST00000564131 CTDP1Q9Y5B0 961 aaPredicted RBP12.91□□□□□ -0.34
RRN3-206ENST00000564131 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 TNFRSF10AO00220 468 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
RRN3-206ENST00000564131 RAB30Q15771 203 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 TKFCQ3LXA3 575 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
RRN3-206ENST00000564131 MTIF3Q9H2K0 278 aaKnown RBP12.9□□□□□ -0.34
RRN3-206ENST00000564131 IL23AQ9NPF7 189 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
RRN3-206ENST00000564131 Q9Y3F1 56 aa12.9□□□□□ -0.34
RRN3-206ENST00000564131 ASB14A6NK59 587 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
RRN3-206ENST00000564131 GPAA1O43292 621 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 BMP3P12645 472 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 PBX2P40425 430 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
RRN3-206ENST00000564131 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
RRN3-206ENST00000564131 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 VTI1AQ96AJ9 217 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 EPB41L4AQ9HCS5 686 aaPredicted RBP12.89□□□□□ -0.35
RRN3-206ENST00000564131 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
RRN3-206ENST00000564131 ZNF536O15090 1300 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 TRANK1O15050 2925 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 STAT2P52630 851 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 SLFN13Q68D06 897 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 GPATCH3Q96I76 525 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
RRN3-206ENST00000564131 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 ASTN1O14525 1302 aa12.88□□□□□ -0.35
RRN3-206ENST00000564131 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 ZEB2O60315 1214 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 FGBP02675 491 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 TDO2P48775 406 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 PDE4BQ07343 736 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
RRN3-206ENST00000564131 CXCL17Q6UXB2 119 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 LRRC47Q8N1G4 583 aaKnown RBP12.87□□□□□ -0.35
RRN3-206ENST00000564131 MORC4Q8TE76 937 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 BCL11AQ9H165 835 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 DCTPP1Q9H773 170 aa12.87□□□□□ -0.35
RRN3-206ENST00000564131 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms