RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 LRRC37A2A6NM11 1700 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 ASB14A6NK59 587 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 NMT2O60551 498 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 ICAM1P05362 532 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
SNX29-203ENST00000564111 TRPV1Q8NER1 839 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 MPHOSPH6Q99547 160 aaKnown RBP17.4■□□□□ 0.38
SNX29-203ENST00000564111 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 NEDD4P46934 1319 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 WDR19Q8NEZ3 1342 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 KCTD1Q719H9 257 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 FAM184BQ9ULE4 1060 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 TACC3Q9Y6A5 838 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 POTEB2H3BUK9 544 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 CHMLP26374 656 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 ASPRV1Q53RT3 343 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 RNF180Q86T96 592 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 CCPG1Q9ULG6 757 aa17.39■□□□□ 0.37
SNX29-203ENST00000564111 PGK2P07205 417 aa17.38■□□□□ 0.37
SNX29-203ENST00000564111 PDHBP11177 359 aa17.38■□□□□ 0.37
SNX29-203ENST00000564111 ZNF543Q08ER8 600 aa17.38■□□□□ 0.37
SNX29-203ENST00000564111 TRERF1Q96PN7 1200 aa17.38■□□□□ 0.37
SNX29-203ENST00000564111 ZSCAN10Q96SZ4 725 aaPredicted RBP17.38■□□□□ 0.37
SNX29-203ENST00000564111 INCENPQ9NQS7 918 aa17.38■□□□□ 0.37
SNX29-203ENST00000564111 TSEN34Q9BSV6 310 aaKnown RBP17.37■□□□□ 0.37
SNX29-203ENST00000564111 ABHD16BQ9H3Z7 469 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 ZNF536O15090 1300 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 B4DLN1 442 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 KDM4AO75164 1064 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 MRPL12P52815 198 aaKnown RBP17.37■□□□□ 0.37
SNX29-203ENST00000564111 TRAF1Q13077 416 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 C7orf61Q8IZ16 206 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
SNX29-203ENST00000564111 ADD3Q9UEY8 706 aaKnown RBP17.37■□□□□ 0.37
SNX29-203ENST00000564111 ALAS1P13196 640 aa17.36■□□□□ 0.37
SNX29-203ENST00000564111 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
SNX29-203ENST00000564111 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
SNX29-203ENST00000564111 CCDC174Q6PII3 467 aa17.36■□□□□ 0.37
SNX29-203ENST00000564111 KIAA1211Q6ZU35 1233 aa17.36■□□□□ 0.37
SNX29-203ENST00000564111 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
SNX29-203ENST00000564111 SGSM2O43147 1006 aa17.36■□□□□ 0.37
SNX29-203ENST00000564111 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.36■□□□□ 0.37
SNX29-203ENST00000564111 ERICH2A1L162 156 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
SNX29-203ENST00000564111 BMP8BP34820 402 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 C1orf53Q5VUE5 145 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 RALYLQ86SE5 291 aaKnown RBP17.35■□□□□ 0.37
SNX29-203ENST00000564111 FAM133AQ8N9E0 248 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 A1CFQ9NQ94 594 aaKnown RBP17.35■□□□□ 0.37
SNX29-203ENST00000564111 PHF24Q9UPV7 400 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 TNKSO95271 1327 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 B4E1Z4 1266 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 AGBL1Q96MI9 1066 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 HOMER2Q9NSB8 354 aa17.35■□□□□ 0.37
SNX29-203ENST00000564111 MYH6P13533 1939 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 DUSP11O75319 330 aaKnown RBP17.34■□□□□ 0.37
SNX29-203ENST00000564111 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 LRRC41Q15345 812 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 IFIT1BQ5T764 474 aaKnown RBP17.34■□□□□ 0.37
SNX29-203ENST00000564111 ARMCX2Q7L311 632 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 SENP6Q9GZR1 1112 aaPredicted RBP17.34■□□□□ 0.37
SNX29-203ENST00000564111 ZHX1Q9UKY1 873 aaPredicted RBP17.34■□□□□ 0.37
SNX29-203ENST00000564111 MTMR7Q9Y216 660 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 ABCB11O95342 1321 aa17.34■□□□□ 0.37
SNX29-203ENST00000564111 FRMPD2Q68DX3 1309 aaPredicted RBP17.34■□□□□ 0.37
SNX29-203ENST00000564111 MOXD2PA6NHM9 499 aa17.33■□□□□ 0.37
SNX29-203ENST00000564111 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.37
SNX29-203ENST00000564111 CST5P28325 142 aaPredicted RBP17.33■□□□□ 0.37
SNX29-203ENST00000564111 CHRDL2Q6WN34 429 aa17.33■□□□□ 0.37
SNX29-203ENST00000564111 SEZ6LQ9BYH1 1024 aa17.33■□□□□ 0.37
SNX29-203ENST00000564111 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.37
SNX29-203ENST00000564111 SNX17Q15036 470 aa17.33■□□□□ 0.36
SNX29-203ENST00000564111 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
SNX29-203ENST00000564111 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.36
SNX29-203ENST00000564111 NCOA7Q8NI08 942 aa17.33■□□□□ 0.36
SNX29-203ENST00000564111 UPF3AQ9H1J1 476 aaKnown RBP17.33■□□□□ 0.36
SNX29-203ENST00000564111 VTA1Q9NP79 307 aa17.33■□□□□ 0.36
SNX29-203ENST00000564111 CYP39A1Q9NYL5 469 aa17.33■□□□□ 0.36
SNX29-203ENST00000564111 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.36
SNX29-203ENST00000564111 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 ZSWIM5Q9P217 1185 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 LCTP09848 1927 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 MCM3APO60318 1980 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 SNAI1O95863 264 aaPredicted RBP17.32■□□□□ 0.36
SNX29-203ENST00000564111 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 GJC2Q5T442 439 aaPredicted RBP17.32■□□□□ 0.36
SNX29-203ENST00000564111 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 NUP133Q8WUM0 1156 aa17.32■□□□□ 0.36
SNX29-203ENST00000564111 NKX3-2P78367 333 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 LRRC26Q2I0M4 334 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 TTBK2Q6IQ55 1244 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms