RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 WASF1Q92558 559 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 ZSCAN16Q9H4T2 348 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 STK36Q9NRP7 1315 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 FARP2O94887 1054 aaPredicted RBP11.29□□□□□ -0.6
UBFD1-203ENST00000564106 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBFD1-203ENST00000564106 SEC23AQ15436 765 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 MORN1Q5T089 497 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 GPR142Q7Z601 462 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 COA7Q96BR5 231 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
UBFD1-203ENST00000564106 TCP11L1Q9NUJ3 509 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
UBFD1-203ENST00000564106 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 HMGCRP04035 888 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 TSPY3P0CV98 308 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 TSPY8P0CW00 308 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-203ENST00000564106 KIF5BP33176 963 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 UBXN2AP68543 259 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBFD1-203ENST00000564106 RTN1Q16799 776 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 STK11IPQ8N1F8 1099 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-203ENST00000564106 GPRC5AQ8NFJ5 357 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 FEZ1Q99689 392 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 PRO3102Q9H379 93 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
UBFD1-203ENST00000564106 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 TCHHQ07283 1943 aa11.28□□□□□ -0.6
UBFD1-203ENST00000564106 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 MPHOSPH10O00566 681 aaKnown RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 JAK2O60674 1132 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 PRDM1O75626 825 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 CTDNEP1O95476 244 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 IGHA2P01877 340 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 IFNAR1P17181 557 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 CDK8P49336 464 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 CACNB2Q08289 660 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 TRPV1Q8NER1 839 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 CTCFLQ8NI51 663 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 PAWRQ96IZ0 340 aaKnown RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 ORC3Q9UBD5 711 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-203ENST00000564106 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 PFASO15067 1338 aa11.27□□□□□ -0.61
UBFD1-203ENST00000564106 MBD3O95983 291 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 XBP1P17861 261 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 KRT85P78386 507 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 TFAP4Q01664 338 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 SSRP1Q08945 709 aaKnown RBP11.26□□□□□ -0.61
UBFD1-203ENST00000564106 TRIM29Q14134 588 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 LHX8Q68G74 356 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 ANKS1AQ92625 1134 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 DPF3Q92784 378 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 C8orf76Q96K31 380 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
UBFD1-203ENST00000564106 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
UBFD1-203ENST00000564106 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
UBFD1-203ENST00000564106 RASA1P20936 1047 aa11.25□□□□□ -0.61
UBFD1-203ENST00000564106 GNAQP50148 359 aa11.25□□□□□ -0.61
UBFD1-203ENST00000564106 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
UBFD1-203ENST00000564106 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
UBFD1-203ENST00000564106 TMEM87AQ8NBN3 555 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms