RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 MCATQ8IVS2 390 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 SMYD4Q8IYR2 804 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 TCP11L2Q8N4U5 519 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 FAM13CQ8NE31 585 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 ISL2Q96A47 359 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 ATG4CQ96DT6 458 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 TMEM87BQ96K49 555 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 NBPF4Q96M43 638 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 UBL7Q96S82 380 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 TM9SF2Q99805 663 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 FBRSQ9HAH7 460 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 ACTR10Q9NZ32 417 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 ATP7BP35670 1465 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 PLSCR1O15162 318 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 KLF4O43474 513 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 RAB6AP20340 208 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 YARSP54577 528 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 EVA1CP58658 441 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 ADGRE1Q14246 886 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 MBTPS1Q14703 1052 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 SLC6A19Q695T7 634 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 Q6ZS46 218 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 NLRC3Q7RTR2 1065 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 MARCH10Q8NA82 808 aaPredicted RBP8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 OSBPL2Q9H1P3 480 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 ZSWIM4Q9H7M6 989 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 PCOLCE2Q9UKZ9 415 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 CEP350Q5VT06 3117 aa8.3□□□□□ -1.08
HERPUD1-208ENST00000563911 ACEP12821 1306 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 RAG1P15918 1043 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 GUCY2CP25092 1073 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 RAB33AQ14088 237 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 NKG7Q16617 165 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 MRPL41Q8IXM3 137 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 YIPF2Q9BWQ6 316 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 TNKS2Q9H2K2 1166 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 USP19O94966 1318 aa8.29□□□□□ -1.08
HERPUD1-208ENST00000563911 COL5A2P05997 1499 aaPredicted RBP8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 POLR3AO14802 1390 aaPredicted RBP8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 CPDO75976 1380 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 CASP7P55210 303 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 CDCP2Q5VXM1 449 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 LARP1BQ659C4 914 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 TTC6Q86TZ1 520 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 PHACTR4Q8IZ21 702 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 FBLIM1Q8WUP2 373 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 FAM46AQ96IP4 442 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 DPH2Q9BQC3 489 aaPredicted RBP8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 DAGLAQ9Y4D2 1042 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 SBF2Q86WG5 1849 aa8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 GOLGB1Q14789 3259 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-208ENST00000563911 PARP4Q9UKK3 1724 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 A0A1W2PQH9 124 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 FAM86C2PA6NEL3 165 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 GCP02774 474 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 NFICP08651 508 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 SLBPQ14493 270 aaKnown RBP eCLIP8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 SGO2Q562F6 1265 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 INTS3Q68E01 1043 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 C19orf47Q8N9M1 422 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 UTP4Q969X6 686 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 ACSS3Q9H6R3 686 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 ST7Q9NRC1 585 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 SIRPGQ9P1W8 387 aa8.27□□□□□ -1.09
HERPUD1-208ENST00000563911 RNF225M0QZC1 329 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 BMP3P12645 472 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 BMS1Q14692 1282 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 SLC15A2Q16348 729 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 FXNQ16595 210 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 UVSSAQ2YD98 709 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 PRAMEF13Q5VWM6 474 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 UNC5AQ6ZN44 842 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 SLFN12Q8IYM2 578 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 TAB3Q8N5C8 712 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 XAGE3Q8WTP9 111 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 MEGF10Q96KG7 1140 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 SLC9A7Q96T83 725 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 KIF2CQ99661 725 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 FOXQ1Q9C009 403 aa8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-208ENST00000563911 LRRC37A3O60309 1634 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 KRBA1A5PL33 1030 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 CST3P01034 146 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 ACRP10323 421 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 SERINC3Q13530 473 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 DZIP1LQ8IYY4 767 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 CELF2-AS1Q8N7Q2 184 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 MYRFLQ96LU7 910 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms