RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 FAM187AA6NFU0 413 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 H3BRB1 525 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 PEX10O60683 326 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 CSF1RP07333 972 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 BMP1P13497 986 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 EPHB4P54760 987 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 HDLBPQ00341 1268 aaKnown RBP9.14□□□□□ -0.95
TCF4-221ENST00000563888 TFF2Q03403 129 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 IFIT5Q13325 482 aaKnown RBP9.14□□□□□ -0.95
TCF4-221ENST00000563888 CCL14Q16627 93 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 AKNAD1Q5T1N1 836 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 CAPN12Q6ZSI9 719 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 VPS37DQ86XT2 251 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 SCYL3Q8IZE3 742 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 STAG2Q8N3U4 1231 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 MEIOBQ8N635 442 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 FAM84BQ96KN1 310 aaPredicted RBP9.14□□□□□ -0.95
TCF4-221ENST00000563888 TUT1Q9H6E5 874 aaKnown RBP9.14□□□□□ -0.95
TCF4-221ENST00000563888 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.14□□□□□ -0.95
TCF4-221ENST00000563888 AGTPBP1Q9UPW5 1226 aa9.14□□□□□ -0.95
TCF4-221ENST00000563888 SPEF2Q9C093 1822 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 TRIM43BA6NCK2 446 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 NEURL1BA8MQ27 555 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 ICMTO60725 284 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 CNGA1P29973 690 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 GCLCP48506 637 aaPredicted RBP9.13□□□□□ -0.95
TCF4-221ENST00000563888 NFIAQ12857 509 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 TAF7LQ5H9L4 462 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 GNASQ5JWF2 1037 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 KSR2Q6VAB6 950 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 ZFPM1Q8IX07 1006 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 MICALL1Q8N3F8 863 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 TRIM43Q96BQ3 446 aaPredicted RBP9.13□□□□□ -0.95
TCF4-221ENST00000563888 C2orf49Q9BVC5 232 aaPredicted RBP9.13□□□□□ -0.95
TCF4-221ENST00000563888 NIFKQ9BYG3 293 aaKnown RBP9.13□□□□□ -0.95
TCF4-221ENST00000563888 POLMQ9NP87 494 aaPredicted RBP9.13□□□□□ -0.95
TCF4-221ENST00000563888 CNNM1Q9NRU3 951 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 LRRFIP2Q9Y608 721 aaKnown RBP9.13□□□□□ -0.95
TCF4-221ENST00000563888 CHD7Q9P2D1 2997 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 MGAMO43451 1857 aa9.13□□□□□ -0.95
TCF4-221ENST00000563888 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.12□□□□□ -0.95
TCF4-221ENST00000563888 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.12□□□□□ -0.95
TCF4-221ENST00000563888 PHF20L1A8MW92 1017 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 KCNQ1P51787 676 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 ADGRE1Q14246 886 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 TRIM60Q495X7 471 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 GJC2Q5T442 439 aaPredicted RBP9.12□□□□□ -0.95
TCF4-221ENST00000563888 C16orf46Q6P387 395 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 LDHAL6AQ6ZMR3 332 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 CCDC129Q6ZRS4 1044 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 CCAR1Q8IX12 1150 aaKnown RBP9.12□□□□□ -0.95
TCF4-221ENST00000563888 HRH3Q9Y5N1 445 aa9.12□□□□□ -0.95
TCF4-221ENST00000563888 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
TCF4-221ENST00000563888 GRXCR1A8MXD5 290 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 SMIM22K7EJ46 135 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 BMP2P12643 396 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 XRCC5P13010 732 aaKnown RBP9.11□□□□□ -0.95
TCF4-221ENST00000563888 GPC1P35052 558 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 NOS2P35228 1153 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 GCKRQ14397 625 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 CDC42EP5Q6NZY7 148 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 SLC39A5Q6ZMH5 540 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
TCF4-221ENST00000563888 CCDC146Q8IYE0 955 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 TBC1D22AQ8WUA7 517 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 UIMC1Q96RL1 719 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 INSM2Q96T92 566 aaPredicted RBP9.11□□□□□ -0.95
TCF4-221ENST00000563888 PLA2G12BQ9BX93 195 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 ASCC2Q9H1I8 757 aaPredicted RBP9.11□□□□□ -0.95
TCF4-221ENST00000563888 PDLIM7Q9NR12 457 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 ARAP2Q8WZ64 1704 aa9.11□□□□□ -0.95
TCF4-221ENST00000563888 RPAP1Q9BWH6 1393 aaPredicted RBP9.11□□□□□ -0.95
TCF4-221ENST00000563888 CFAP54Q96N23 3096 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 DNM1LO00429 736 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 FAM13AO94988 1023 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 ITGB8P26012 769 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 RGS2P41220 211 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 MARSP56192 900 aaKnown RBP9.1□□□□□ -0.95
TCF4-221ENST00000563888 SPP2Q13103 211 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 PABPC4Q13310 644 aaKnown RBP eCLIP9.1□□□□□ -0.95
TCF4-221ENST00000563888 AAMPQ13685 434 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 TEAD4Q15561 434 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 C6orf118Q5T5N4 469 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 ZNF787Q6DD87 383 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 HELQQ8TDG4 1101 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 SOCS4Q8WXH5 440 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 FERMT2Q96AC1 680 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 MRIQ9BWK5 157 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 PCGF6Q9BYE7 350 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 CWC22Q9HCG8 908 aaKnown RBP9.1□□□□□ -0.95
TCF4-221ENST00000563888 C11orf16Q9NQ32 467 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
TCF4-221ENST00000563888 DDX20Q9UHI6 824 aaKnown RBP9.1□□□□□ -0.95
TCF4-221ENST00000563888 RNF144AP50876 292 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms