RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 AKNAD1Q5T1N1 836 aa29.71■■■□□ 2.35
SPG7-208ENST00000563783 BTNL9Q6UXG8 535 aa29.71■■■□□ 2.35
SPG7-208ENST00000563783 SLC39A5Q6ZMH5 540 aa29.71■■■□□ 2.35
SPG7-208ENST00000563783 SNAI1O95863 264 aaPredicted RBP29.7■■■□□ 2.35
SPG7-208ENST00000563783 RTP1P59025 263 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 IKQ13123 557 aaPredicted RBP29.7■■■□□ 2.35
SPG7-208ENST00000563783 LRIT3Q3SXY7 679 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 ANO1Q5XXA6 986 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 MFSD6Q6ZSS7 791 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 TDHQ8IZJ6 230 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 TSEN34Q9BSV6 310 aaKnown RBP29.7■■■□□ 2.35
SPG7-208ENST00000563783 ABHD16BQ9H3Z7 469 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 FAM184BQ9ULE4 1060 aa29.7■■■□□ 2.35
SPG7-208ENST00000563783 TAL1P17542 331 aaPredicted RBP29.69■■■□□ 2.34
SPG7-208ENST00000563783 PNMA2Q9UL42 364 aa29.69■■■□□ 2.34
SPG7-208ENST00000563783 KCTD1Q719H9 257 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 FAM133AQ8N9E0 248 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 FGD4Q96M96 766 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 UBE2OQ9C0C9 1292 aaKnown RBP29.68■■■□□ 2.34
SPG7-208ENST00000563783 TOMM22Q9NS69 142 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 DIAPH3Q9NSV4 1193 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 RNF146Q9NTX7 359 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 PRR12Q9ULL5 1215 aa29.68■■■□□ 2.34
SPG7-208ENST00000563783 ISY1Q9ULR0 285 aaKnown RBP29.68■■■□□ 2.34
SPG7-208ENST00000563783 ATN1P54259 1190 aaPredicted RBP29.67■■■□□ 2.34
SPG7-208ENST00000563783 PRKAG2Q9UGJ0 569 aa29.67■■■□□ 2.34
SPG7-208ENST00000563783 ADAMTS4O75173 837 aa29.66■■■□□ 2.34
SPG7-208ENST00000563783 DUSP11O75319 330 aaKnown RBP29.66■■■□□ 2.34
SPG7-208ENST00000563783 ADCYAP1R1P41586 468 aa29.66■■■□□ 2.34
SPG7-208ENST00000563783 TMEM47Q9BQJ4 181 aa29.66■■■□□ 2.34
SPG7-208ENST00000563783 A1CFQ9NQ94 594 aaKnown RBP29.66■■■□□ 2.34
SPG7-208ENST00000563783 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.66■■■□□ 2.34
SPG7-208ENST00000563783 ICAM1P05362 532 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 CST5P28325 142 aaPredicted RBP29.65■■■□□ 2.34
SPG7-208ENST00000563783 SLC4A3P48751 1232 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 ACVR2BQ13705 512 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 CCDC178Q5BJE1 867 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 RRP12Q5JTH9 1297 aaKnown RBP29.65■■■□□ 2.34
SPG7-208ENST00000563783 ESR2Q92731 530 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 AGBL1Q96MI9 1066 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 LBHD1Q9BQE6 289 aaPredicted RBP29.65■■■□□ 2.34
SPG7-208ENST00000563783 DSCC1Q9BVC3 393 aa29.65■■■□□ 2.34
SPG7-208ENST00000563783 RANBP17Q9H2T7 1088 aaKnown RBP29.65■■■□□ 2.34
SPG7-208ENST00000563783 POTEB2H3BUK9 544 aa29.64■■■□□ 2.34
SPG7-208ENST00000563783 CCDC96Q2M329 555 aa29.64■■■□□ 2.34
SPG7-208ENST00000563783 ARMCX2Q7L311 632 aa29.64■■■□□ 2.34
SPG7-208ENST00000563783 TRERF1Q96PN7 1200 aa29.64■■■□□ 2.34
SPG7-208ENST00000563783 HOMER2Q9NSB8 354 aa29.64■■■□□ 2.34
SPG7-208ENST00000563783 LCTP09848 1927 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 LRRC37A2A6NM11 1700 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 LOC102724159A0A0B4J2E5 919 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 MOXD2PA6NHM9 499 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 ASB14A6NK59 587 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 ZNF213O14771 459 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 PGK1P00558 417 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 SNHG28P0DPA3 235 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 HAND2P61296 217 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 NKX3-2P78367 333 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 PWP2Q15269 919 aaKnown RBP29.63■■■□□ 2.33
SPG7-208ENST00000563783 CWC27Q6UX04 472 aaKnown RBP29.63■■■□□ 2.33
SPG7-208ENST00000563783 TBC1D10CQ8IV04 446 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 KLHDC9Q8NEP7 349 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 ZHX1Q9UKY1 873 aaPredicted RBP29.63■■■□□ 2.33
SPG7-208ENST00000563783 ATP11BQ9Y2G3 1177 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 SUPT16HQ9Y5B9 1047 aaKnown RBP29.63■■■□□ 2.33
SPG7-208ENST00000563783 SYNRGQ9UMZ2 1314 aa29.63■■■□□ 2.33
SPG7-208ENST00000563783 DGKHQ86XP1 1220 aa29.62■■■□□ 2.33
SPG7-208ENST00000563783 UPF3AQ9H1J1 476 aaKnown RBP29.62■■■□□ 2.33
SPG7-208ENST00000563783 CTNNA3Q9UI47 895 aa29.62■■■□□ 2.33
SPG7-208ENST00000563783 SOX1O00570 391 aaPredicted RBP29.61■■■□□ 2.33
SPG7-208ENST00000563783 MYCNP04198 464 aaPredicted RBP29.61■■■□□ 2.33
SPG7-208ENST00000563783 PDHBP11177 359 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 ALAS1P13196 640 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 SYDE2Q5VT97 1194 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 CCDC144CPQ8IYA2 1237 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 NUP133Q8WUM0 1156 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 KATNBL1Q9H079 304 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 CCPG1Q9ULG6 757 aa29.61■■■□□ 2.33
SPG7-208ENST00000563783 A0A1W2PQ45 241 aaPredicted RBP29.6■■■□□ 2.33
SPG7-208ENST00000563783 A0A1W2PQY0 241 aa29.6■■■□□ 2.33
SPG7-208ENST00000563783 CCDC144BQ3MJ40 725 aa29.6■■■□□ 2.33
SPG7-208ENST00000563783 TRIM60Q495X7 471 aa29.6■■■□□ 2.33
SPG7-208ENST00000563783 CCSAPQ6IQ19 270 aaPredicted RBP29.6■■■□□ 2.33
SPG7-208ENST00000563783 PCSK9Q8NBP7 692 aaKnown RBP29.6■■■□□ 2.33
SPG7-208ENST00000563783 SPC25Q9HBM1 224 aa29.6■■■□□ 2.33
SPG7-208ENST00000563783 CYP39A1Q9NYL5 469 aa29.6■■■□□ 2.33
SPG7-208ENST00000563783 GJA9P57773 515 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 MDM2Q00987 491 aaPredicted RBP29.59■■■□□ 2.33
SPG7-208ENST00000563783 CNTN2Q02246 1040 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 ZNF543Q08ER8 600 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 GPATCH4Q5T3I0 446 aaKnown RBP29.59■■■□□ 2.33
SPG7-208ENST00000563783 CCDC174Q6PII3 467 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 RASGRP2Q7LDG7 609 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 IQCA1Q86XH1 822 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 ANKS1AQ92625 1134 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 FERMT2Q96AC1 680 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 TOX2Q96NM4 488 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 MAF1Q9H063 256 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 PDLIM7Q9NR12 457 aa29.59■■■□□ 2.33
SPG7-208ENST00000563783 NEDD4P46934 1319 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms