RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 CPXCR1Q8N123 301 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 FERMT2Q96AC1 680 aa20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 TTYH1Q9H313 450 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3B-204ENST00000563720 TMEM232C9JQI7 657 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 MCCP23508 829 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SLC1A4P43007 532 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 MFAP1P55081 439 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SNX17Q15036 470 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 PRAMEF19Q5SWL8 479 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 SH3RF1Q7Z6J0 888 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 RAVER2Q9HCJ3 691 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 DIS3Q9Y2L1 958 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3B-204ENST00000563720 TRIM43BA6NCK2 446 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 STAT2P52630 851 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 OAZ1P54368 228 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 LRRC41Q15345 812 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RRP12Q5JTH9 1297 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RASGRP2Q7LDG7 609 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TBC1D10CQ8IV04 446 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TRIM43Q96BQ3 446 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 CHMP4CQ96CF2 233 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 PRDM6Q9NQX0 595 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TOMM22Q9NS69 142 aa20.57■□□□□ 0.88
MAP1LC3B-204ENST00000563720 HIP1O00291 1037 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 AKNAD1Q5T1N1 836 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RCSD1Q6JBY9 416 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 FAM160B2Q86V87 743 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 STAG1Q8WVM7 1258 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 SYMPKQ92797 1274 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RNPC3Q96LT9 517 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TINF2Q9BSI4 451 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TCP11L1Q9NUJ3 509 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 CTDP1Q9Y5B0 961 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 LCTP09848 1927 aa20.56■□□□□ 0.88
MAP1LC3B-204ENST00000563720 DNAJC25-GNG10A0A024R161 153 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 PLA2G6O60733 806 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 FDX1P10109 184 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 PCP11498 1178 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 GSPT1P15170 499 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 SLC4A3P48751 1232 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TLE2Q04725 743 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 C1orf53Q5VUE5 145 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 MFSD6Q6ZSS7 791 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 KCTD1Q719H9 257 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 CHURC1Q8WUH1 139 aa20.55■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TTC22Q5TAA0 569 aa20.54■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
MAP1LC3B-204ENST00000563720 NRBP1Q9UHY1 535 aa20.54■□□□□ 0.88
MAP1LC3B-204ENST00000563720 ZNF536O15090 1300 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TMEM265A0A087WTH1 108 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 CLTBP09497 229 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TOP1P11387 765 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 CHST13Q8NET6 341 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 DCAF4Q8WV16 495 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 DDX11Q96FC9 970 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 IL25Q9H293 177 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 XPNPEP3Q9NQH7 507 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 PRR12Q9ULL5 1215 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 NEDD4P46934 1319 aa20.53■□□□□ 0.88
MAP1LC3B-204ENST00000563720 EYSQ5T1H1 3165 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 ZNF213O14771 459 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RARBP10826 455 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RAG1P15918 1043 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 TAL1P17542 331 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 AGBL1Q96MI9 1066 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 DSCC1Q9BVC3 393 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 RNF41Q9H4P4 317 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 FBXO40Q9UH90 709 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 PHF24Q9UPV7 400 aa20.52■□□□□ 0.88
MAP1LC3B-204ENST00000563720 MYH6P13533 1939 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ZNF865P0CJ78 1059 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ITGB8P26012 769 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 CCDC96Q2M329 555 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 RNF180Q86T96 592 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 FGD4Q96M96 766 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 HOMER2Q9NSB8 354 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 VCANP13611 3396 aa20.51■□□□□ 0.87
MAP1LC3B-204ENST00000563720 PQBP1O60828 265 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 EPHB4P54760 987 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 SNAP25P60880 206 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ZNF467Q7Z7K2 595 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ANKRD35Q8N283 1001 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ESR2Q92731 530 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 TTC14Q96N46 770 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 SYNGAP1Q96PV0 1343 aa20.5■□□□□ 0.87
MAP1LC3B-204ENST00000563720 SNAI1O95863 264 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 PGK1P00558 417 aa20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 FPGSQ05932 587 aa20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 CCDC174Q6PII3 467 aa20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ACAD9Q9H845 621 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms