RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 A0A087WUV0 522 aaPredicted RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 ERCC5P28715 1186 aaPredicted RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 FAM196AQ6ZSG2 479 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 KRT25Q7Z3Z0 450 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 PAGE5Q96GU1 130 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 FAM207AQ9NSI2 230 aaPredicted RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 WDR19Q8NEZ3 1342 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 SOWAHDA6NJG2 315 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 USP8P40818 1118 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 GRIN1Q05586 938 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 TBC1D9BQ66K14 1250 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 FAM84BQ96KN1 310 aaPredicted RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.55
RNF40-204ENST00000563683 GTPBP6O43824 516 aaPredicted RBP11.65□□□□□ -0.55
RNF40-204ENST00000563683 TACC1O75410 805 aa11.65□□□□□ -0.55
RNF40-204ENST00000563683 SCNN1DP51172 638 aa11.65□□□□□ -0.55
RNF40-204ENST00000563683 CALCRLQ16602 461 aa11.65□□□□□ -0.55
RNF40-204ENST00000563683 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.55
RNF40-204ENST00000563683 SUGP1Q8IWZ8 645 aaKnown RBP11.65□□□□□ -0.55
RNF40-204ENST00000563683 VIPAS39Q9H9C1 493 aa11.65□□□□□ -0.55
RNF40-204ENST00000563683 HLTFQ14527 1009 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNF40-204ENST00000563683 ODF2Q5BJF6 829 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 LRRC31Q6UY01 552 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 FAM204AQ9H8W3 233 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 INTS13Q9NVM9 706 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
RNF40-204ENST00000563683 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 MMS22LQ6ZRQ5 1243 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 GDAP1L1Q96MZ0 367 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 PNKPQ96T60 521 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 HINFPQ9BQA5 517 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 MRPL44Q9H9J2 332 aaKnown RBP11.64□□□□□ -0.55
RNF40-204ENST00000563683 SLC39A2Q9NP94 309 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
RNF40-204ENST00000563683 GOLGA6L10A6NI86 522 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 SPDYE3A6NKU9 549 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 CPP00450 1065 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 NELFCDQ8IXH7 590 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 OR8K1Q8NGG5 319 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 MYO1AQ9UBC5 1043 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 SAMM50Q9Y512 469 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
RNF40-204ENST00000563683 OVOS2A0A0G2JMS6 1433 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 TBCAO75347 108 aaKnown RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 PCP11498 1178 aaKnown RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 CLEC4GQ6UXB4 293 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 TMTC3Q6ZXV5 915 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 TADA2BQ86TJ2 420 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 VPS36Q86VN1 386 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 NWD1Q149M9 1564 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 H0YHG0 523 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 N4BP1O75113 896 aaKnown RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 ADCY7P51828 1080 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 PRPF4BQ13523 1007 aaKnown RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 GDAQ9Y2T3 454 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 ABCC12Q96J65 1359 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 FAM170AA1A519 330 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 RNASE9P60153 205 aaKnown RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 TRIM14Q14142 442 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 CCDC51Q96ER9 411 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
RNF40-204ENST00000563683 MED1Q15648 1581 aaPredicted RBP11.63□□□□□ -0.55
RNF40-204ENST00000563683 TEX33O43247 280 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 SLC1A4P43007 532 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 CKAP4Q07065 602 aaKnown RBP11.62□□□□□ -0.55
RNF40-204ENST00000563683 ITPK1Q13572 414 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
RNF40-204ENST00000563683 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 NLRC4Q9NPP4 1024 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 STK36Q9NRP7 1315 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 H7C1D1 291 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 SEMA3EO15041 775 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 ZNF18P17022 549 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 LONP1P36776 959 aaKnown RBP11.62□□□□□ -0.55
RNF40-204ENST00000563683 VSNL1P62760 191 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 CUL4BQ13620 913 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 FOXR1Q6PIV2 292 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 DPP8Q6V1X1 898 aaPredicted RBP11.62□□□□□ -0.55
RNF40-204ENST00000563683 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 SYCP3Q8IZU3 236 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 ACRBPQ8NEB7 543 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 JAKMIP2Q96AA8 810 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 NR1I3Q14994 352 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 USH1GQ495M9 461 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 WDR93Q6P2C0 686 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 MICALL1Q8N3F8 863 aa11.62□□□□□ -0.55
RNF40-204ENST00000563683 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
RNF40-204ENST00000563683 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms