RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SLC4A3P48751 1232 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 TDO2P48775 406 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 GJA9P57773 515 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 CCDC144BQ3MJ40 725 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 MFSD5Q6N075 450 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
NME3-204ENST00000563498 ADCY6O43306 1168 aa22.26■■□□□ 1.15
NME3-204ENST00000563498 NKX3-2P78367 333 aa22.26■■□□□ 1.15
NME3-204ENST00000563498 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
NME3-204ENST00000563498 ARMCX2Q7L311 632 aa22.26■■□□□ 1.15
NME3-204ENST00000563498 A0A0U1RQG5 324 aaPredicted RBP22.25■■□□□ 1.15
NME3-204ENST00000563498 PATL2C9JE40 543 aaKnown RBP22.25■■□□□ 1.15
NME3-204ENST00000563498 PRDM1O75626 825 aa22.25■■□□□ 1.15
NME3-204ENST00000563498 APPP05067 770 aa22.25■■□□□ 1.15
NME3-204ENST00000563498 PPIGQ13427 754 aaKnown RBP eCLIP22.25■■□□□ 1.151e-15■□□□□ 10.6
NME3-204ENST00000563498 LRRFIP1Q32MZ4 808 aaKnown RBP22.25■■□□□ 1.15
NME3-204ENST00000563498 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.25■■□□□ 1.158e-10■□□□□ 9.4
NME3-204ENST00000563498 DCTPP1Q9H773 170 aa22.25■■□□□ 1.15
NME3-204ENST00000563498 ARVCFO00192 962 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 BMP3P12645 472 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 GRIN2CQ14957 1233 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 GNASQ5JWF2 1037 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 C20orf194Q5TEA3 1177 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 SLFN13Q68D06 897 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 CCDC144CPQ8IYA2 1237 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 IFNL3Q8IZI9 196 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 LRRC47Q8N1G4 583 aaKnown RBP22.24■■□□□ 1.15
NME3-204ENST00000563498 NEDD1Q8NHV4 660 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 KATNBL1Q9H079 304 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 PRUNE2Q8WUY3 3088 aa22.24■■□□□ 1.15
NME3-204ENST00000563498 M0R2C6 588 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 IRX5P78411 483 aaPredicted RBP22.23■■□□□ 1.15
NME3-204ENST00000563498 PDE4BQ07343 736 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 RASIP1Q5U651 963 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 FAM133AQ8N9E0 248 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 SYMPKQ92797 1274 aaKnown RBP22.23■■□□□ 1.15
NME3-204ENST00000563498 VTI1AQ96AJ9 217 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 NACAP1Q9BZK3 213 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 ZNF576Q9H609 170 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 ACAD9Q9H845 621 aa22.23■■□□□ 1.15
NME3-204ENST00000563498 SPTBN5Q9NRC6 3674 aaKnown RBP22.22■■□□□ 1.15
NME3-204ENST00000563498 MCM3APO60318 1980 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 CTAGE5O15320 804 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 TSPY3P0CV98 308 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 TSPY8P0CW00 308 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 STAT2P52630 851 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 C16orf59Q7L2K0 433 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 TMEM199Q8N511 208 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 TIFAQ96CG3 184 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 GMCL1Q96IK5 515 aa22.22■■□□□ 1.15
NME3-204ENST00000563498 TMEM232C9JQI7 657 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 TLR3O15455 904 aaKnown RBP22.21■■□□□ 1.15
NME3-204ENST00000563498 SLC3A2P08195 630 aaKnown RBP22.21■■□□□ 1.15
NME3-204ENST00000563498 TKFCQ3LXA3 575 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 PPP4R3BQ5MIZ7 849 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 TMEM240Q5SV17 173 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 TSHZ3Q63HK5 1081 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 FAM160B2Q86V87 743 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 CHURC1Q8WUH1 139 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 HOMER2Q9NSB8 354 aa22.21■■□□□ 1.15
NME3-204ENST00000563498 PLA2G6O60733 806 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 CSF2RAP15509 400 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 CNTN2Q02246 1040 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 TNFAIP2Q03169 654 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 PSRC1Q6PGN9 363 aaPredicted RBP22.2■■□□□ 1.14
NME3-204ENST00000563498 STAG1Q8WVM7 1258 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 A1CFQ9NQ94 594 aaKnown RBP22.2■■□□□ 1.14
NME3-204ENST00000563498 ZNF536O15090 1300 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 TTC41PQ6P2S7 1318 aa22.2■■□□□ 1.14
NME3-204ENST00000563498 ASB14A6NK59 587 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 CABYRO75952 493 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 CD4P01730 458 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 TFAP4Q01664 338 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 CCDC129Q6ZRS4 1044 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 SLC43A3Q8NBI5 491 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 SEZ6LQ9BYH1 1024 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 RNF146Q9NTX7 359 aa22.19■■□□□ 1.14
NME3-204ENST00000563498 SLC1A4P43007 532 aa22.18■■□□□ 1.14
NME3-204ENST00000563498 PPARAQ07869 468 aa22.18■■□□□ 1.14
NME3-204ENST00000563498 AGBL1Q96MI9 1066 aa22.18■■□□□ 1.14
NME3-204ENST00000563498 PBX4Q9BYU1 374 aa22.18■■□□□ 1.14
NME3-204ENST00000563498 NAPBQ9H115 298 aa22.18■■□□□ 1.14
NME3-204ENST00000563498 GNEQ9Y223 722 aaKnown RBP22.18■■□□□ 1.14
NME3-204ENST00000563498 ASTN1O14525 1302 aa22.17■■□□□ 1.14
NME3-204ENST00000563498 SOWAHBA6NEL2 793 aa22.17■■□□□ 1.14
NME3-204ENST00000563498 ERC2O15083 957 aa22.17■■□□□ 1.14
NME3-204ENST00000563498 ZNF365Q70YC5 407 aa22.17■■□□□ 1.14
NME3-204ENST00000563498 SEC62Q99442 399 aaKnown RBP22.17■■□□□ 1.14
NME3-204ENST00000563498 PPP1R12CQ9BZL4 782 aa22.17■■□□□ 1.14
NME3-204ENST00000563498 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.16■■□□□ 1.14
NME3-204ENST00000563498 PBX2P40425 430 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 BEX3Q00994 111 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 TJAP1Q5JTD0 557 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 ZMYM1Q5SVZ6 1142 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 NOL8Q76FK4 1167 aaKnown RBP22.16■■□□□ 1.14
NME3-204ENST00000563498 TLK2Q86UE8 772 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 USP38Q8NB14 1042 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 TRERF1Q96PN7 1200 aa22.16■■□□□ 1.14
NME3-204ENST00000563498 IL23AQ9NPF7 189 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms