RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 NOL9Q5SY16 702 aaKnown RBP5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 TMEM132EQ6IEE7 984 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 GALNT18Q6P9A2 607 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 TMEM52Q8NDY8 209 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 RASGRP4Q8TDF6 673 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 CRBNQ96SW2 442 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 SLC12A9Q9BXP2 914 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 GCM1Q9NP62 436 aa5.69□□□□□ -1.5
HMGB1P33-201ENST00000563485 WTIPA6NIX2 430 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 CBFA2T2O43439 604 aa5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 PNLIPP16233 465 aa5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 EIF6P56537 245 aaKnown RBP5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 SRSF3P84103 164 aaKnown RBP5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 CWF19L1Q69YN2 538 aaKnown RBP5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 FIBCD1Q8N539 461 aa5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 SPATA32Q96LK8 384 aa5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 JMJD8Q96S16 334 aa5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 SRRTQ9BXP5 876 aaKnown RBP5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 FHOD1Q9Y613 1164 aa5.68□□□□□ -1.5
HMGB1P33-201ENST00000563485 NUAK1O60285 661 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 ITGA4P13612 1032 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 PRKCAP17252 672 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 VIPR1P32241 457 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 GJA8P48165 433 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 GIPRP48546 466 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 NASPP49321 788 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 ERVFRD-1P60508 538 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 CIAPIN1Q6FI81 312 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 NUP43Q8NFH3 380 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 NOL6Q9H6R4 1146 aaKnown RBP5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 IMPACTQ9P2X3 320 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 MBD1Q9UIS9 605 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 PCDHB10Q9UN67 800 aa5.67□□□□□ -1.5
HMGB1P33-201ENST00000563485 A0A1W2PQ45 241 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 A0A1W2PQY0 241 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 PPP2R5DQ14738 602 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 GNPTABQ3T906 1256 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 SIAH1Q8IUQ4 282 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 NAT16Q8N8M0 369 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 C19orf47Q8N9M1 422 aaKnown RBP5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 RGS22Q8NE09 1264 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 ZDHHC15Q96MV8 337 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 ACBD3Q9H3P7 528 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 ACSL6Q9UKU0 697 aa5.66□□□□□ -1.5
HMGB1P33-201ENST00000563485 HRKO00198 91 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 FGF10O15520 208 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 CD3EP07766 207 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 IFNGR1P15260 489 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 ARL4AP40617 200 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 YBX1P67809 324 aaKnown RBP5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 CYP4F8P98187 520 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 LAPTM5Q13571 262 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 SSPNQ14714 243 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 TCEAL1Q15170 157 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 ADCY4Q8NFM4 1077 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 OR6P1Q8NGX9 317 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 SHDQ96IW2 340 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 FCRL3Q96P31 734 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 HAUS7Q99871 368 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 KLHL25Q9H0H3 589 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 IRF2BPLQ9H1B7 796 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 PHAXQ9H814 394 aaKnown RBP5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 TNFRSF12AQ9NP84 129 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 SIRT5Q9NXA8 310 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 KLHL14Q9P2G3 628 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 SF3B6Q9Y3B4 125 aaKnown RBP5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 SLC12A7Q9Y666 1083 aa5.65□□□□□ -1.5
HMGB1P33-201ENST00000563485 NUDT19A8MXV4 375 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 MPOP05164 745 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 MSL3P1P0C860 447 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 EPHB3P54753 998 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 MVKQ03426 396 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 RAB3GAP1Q15042 981 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 PPP2R5EQ16537 467 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 AMIGO3Q86WK7 504 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 KLHL6Q8WZ60 621 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 FGD4Q96M96 766 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 TGIF2Q9GZN2 237 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 CNTD2Q9H8S5 307 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 WHRNQ9P202 907 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 KCTD3Q9Y597 815 aa5.64□□□□□ -1.51
HMGB1P33-201ENST00000563485 A0A087WZG4 1122 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 EPHX1P07099 455 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 NOP2P46087 812 aaKnown RBP5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 SLC7A5Q01650 507 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 POU4F1Q01851 419 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 HLA-DQA1Q5Y7H0 255 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 HEATR6Q6AI08 1181 aaKnown RBP5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 CYP2R1Q6VVX0 501 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 TMC6Q7Z403 805 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 JAMLQ86YT9 394 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 FAM169BQ8N8A8 192 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 CPLX3Q8WVH0 158 aa5.63□□□□□ -1.51
HMGB1P33-201ENST00000563485 PTCHD1Q96NR3 888 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms