RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 NMT2O60551 498 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 CLTBP09497 229 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 MCCP23508 829 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 SLC1A4P43007 532 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 ACLYP53396 1101 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 PDE1AP54750 535 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 FAM109BQ6ICB4 259 aaPredicted RBP24.86■■□□□ 1.57
CHD9-208ENST00000563410 FAM160B2Q86V87 743 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 STAG1Q8WVM7 1258 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 HOMER2Q9NSB8 354 aa24.86■■□□□ 1.57
CHD9-208ENST00000563410 TSPY2A6NKD2 308 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 PLA2G6O60733 806 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 DUSP11O75319 330 aaKnown RBP24.85■■□□□ 1.57
CHD9-208ENST00000563410 IRX5P78411 483 aaPredicted RBP24.85■■□□□ 1.57
CHD9-208ENST00000563410 CNTN2Q02246 1040 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 HDAC1Q13547 482 aaPredicted RBP24.85■■□□□ 1.57
CHD9-208ENST00000563410 RASGRP2Q7LDG7 609 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 CHURC1Q8WUH1 139 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 AGBL1Q96MI9 1066 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 KATNBL1Q9H079 304 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 ABHD16BQ9H3Z7 469 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 ISY1Q9ULR0 285 aaKnown RBP24.85■■□□□ 1.57
CHD9-208ENST00000563410 STX8Q9UNK0 236 aa24.85■■□□□ 1.57
CHD9-208ENST00000563410 LRRC37A2A6NM11 1700 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 MOXD2PA6NHM9 499 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 NOVP48745 357 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 KCNA10Q16322 511 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 PPP4R3BQ5MIZ7 849 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 KCTD1Q719H9 257 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 ARMCX2Q7L311 632 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 FAM133AQ8N9E0 248 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 ACAD9Q9H845 621 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 HELLSQ9NRZ9 838 aa24.84■■□□□ 1.57
CHD9-208ENST00000563410 ZBTB47Q9UFB7 747 aaPredicted RBP24.84■■□□□ 1.57
CHD9-208ENST00000563410 KIAA0355O15063 1070 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 PQBP1O60828 265 aaKnown RBP24.83■■□□□ 1.57
CHD9-208ENST00000563410 FGRP09769 529 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 CST5P28325 142 aaPredicted RBP24.83■■□□□ 1.57
CHD9-208ENST00000563410 IKQ13123 557 aaPredicted RBP24.83■■□□□ 1.57
CHD9-208ENST00000563410 ALX1Q15699 326 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 CCDC144BQ3MJ40 725 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 RCSD1Q6JBY9 416 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 ANKRD33Q7Z3H0 272 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 CCDC144CPQ8IYA2 1237 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 GUCD1Q96NT3 240 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 A1CFQ9NQ94 594 aaKnown RBP24.83■■□□□ 1.57
CHD9-208ENST00000563410 STARD7Q9NQZ5 370 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 RNF146Q9NTX7 359 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 CUL9Q8IWT3 2517 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 CDH23Q9H251 3354 aa24.83■■□□□ 1.57
CHD9-208ENST00000563410 ORC4O43929 436 aa24.82■■□□□ 1.56
CHD9-208ENST00000563410 FAAP100Q0VG06 881 aa24.82■■□□□ 1.56
CHD9-208ENST00000563410 NUP133Q8WUM0 1156 aa24.82■■□□□ 1.56
CHD9-208ENST00000563410 FAM227BQ96M60 508 aa24.82■■□□□ 1.56
CHD9-208ENST00000563410 TOX2Q96NM4 488 aa24.82■■□□□ 1.56
CHD9-208ENST00000563410 UPF3AQ9H1J1 476 aaKnown RBP24.82■■□□□ 1.56
CHD9-208ENST00000563410 UNC80Q8N2C7 3258 aa24.81■■□□□ 1.56
CHD9-208ENST00000563410 A0A0D9SFI3 127 aa24.81■■□□□ 1.56
CHD9-208ENST00000563410 RANBP6O60518 1105 aaKnown RBP24.81■■□□□ 1.56
CHD9-208ENST00000563410 GJA9P57773 515 aa24.81■■□□□ 1.56
CHD9-208ENST00000563410 SNAP25P60880 206 aa24.81■■□□□ 1.56
CHD9-208ENST00000563410 TRERF1Q96PN7 1200 aa24.81■■□□□ 1.56
CHD9-208ENST00000563410 PRR12Q9ULL5 1215 aa24.81■■□□□ 1.56
CHD9-208ENST00000563410 SOWAHBA6NEL2 793 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 FGAP02671 866 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 C6orf222P0C671 652 aaPredicted RBP24.8■■□□□ 1.56
CHD9-208ENST00000563410 EPHB4P54760 987 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 TKFCQ3LXA3 575 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 FAM161BQ96MY7 647 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 TMEM39AQ9NV64 488 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 ASTN1O14525 1302 aa24.8■■□□□ 1.56
CHD9-208ENST00000563410 CTAGE5O15320 804 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 ASGR1P07306 291 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 ALAS1P13196 640 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 RAG1P15918 1043 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 MCMDC2Q4G0Z9 681 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 MUM1L1Q5H9M0 696 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 CCDC174Q6PII3 467 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 ELP1O95163 1332 aa24.79■■□□□ 1.56
CHD9-208ENST00000563410 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.78■■□□□ 1.56
CHD9-208ENST00000563410 DCDC2CA8MYV0 355 aa24.78■■□□□ 1.56
CHD9-208ENST00000563410 CDK7P50613 346 aa24.78■■□□□ 1.56
CHD9-208ENST00000563410 ZNF697Q5TEC3 545 aa24.78■■□□□ 1.56
CHD9-208ENST00000563410 ZNF589Q86UQ0 364 aaPredicted RBP24.78■■□□□ 1.56
CHD9-208ENST00000563410 PCSK9Q8NBP7 692 aaKnown RBP24.78■■□□□ 1.56
CHD9-208ENST00000563410 GLT1D1Q96MS3 346 aa24.78■■□□□ 1.56
CHD9-208ENST00000563410 MTMR7Q9Y216 660 aa24.78■■□□□ 1.56
CHD9-208ENST00000563410 DLL1O00548 723 aa24.77■■□□□ 1.56
CHD9-208ENST00000563410 HSPD1P10809 573 aaKnown RBP24.77■■□□□ 1.56
CHD9-208ENST00000563410 NKX3-2P78367 333 aa24.77■■□□□ 1.56
CHD9-208ENST00000563410 SMAD3P84022 425 aaKnown RBP24.77■■□□□ 1.56
CHD9-208ENST00000563410 NMIQ13287 307 aaPredicted RBP24.77■■□□□ 1.56
CHD9-208ENST00000563410 TICAM2Q86XR7 235 aa24.77■■□□□ 1.56
CHD9-208ENST00000563410 DCAF4Q8WV16 495 aa24.77■■□□□ 1.56
CHD9-208ENST00000563410 SPC25Q9HBM1 224 aa24.77■■□□□ 1.56
CHD9-208ENST00000563410 DDX49Q9Y6V7 483 aaKnown RBP24.77■■□□□ 1.56
CHD9-208ENST00000563410 ZMYM6O95789 1325 aa24.77■■□□□ 1.56
CHD9-208ENST00000563410 EYSQ5T1H1 3165 aa24.76■■□□□ 1.55
CHD9-208ENST00000563410 ASB14A6NK59 587 aa24.76■■□□□ 1.55
CHD9-208ENST00000563410 GNASQ5JWF2 1037 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms