RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CCDC129Q6ZRS4 1044 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 CHMP4CQ96CF2 233 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 TOX2Q96NM4 488 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 FSD1Q9BTV5 496 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 NACAP1Q9BZK3 213 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 INCENPQ9NQS7 918 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 HOMER2Q9NSB8 354 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 TMEM39AQ9NV64 488 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 ZNF536O15090 1300 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 SALL3Q9BXA9 1300 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 MCM3APO60318 1980 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 ERC2O15083 957 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 CST5P28325 142 aaPredicted RBP19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 PDE4BQ07343 736 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 LRRFIP1Q32MZ4 808 aaKnown RBP19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 CCDC144BQ3MJ40 725 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 ARMCX2Q7L311 632 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 NUP133Q8WUM0 1156 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 NAPBQ9H115 298 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 UPF3AQ9H1J1 476 aaKnown RBP19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 ABHD16BQ9H3Z7 469 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 FBXO40Q9UH90 709 aa19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
HDGFL3-203ENST00000563404 CTAGE5O15320 804 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 CDK7P50613 346 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 GJA9P57773 515 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 RASGRP2Q7LDG7 609 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 FAM133AQ8N9E0 248 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 RNPC3Q96LT9 517 aaKnown RBP19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 TBX21Q9UL17 535 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 VCANP13611 3396 aa19.97■□□□□ 0.79
HDGFL3-203ENST00000563404 PRUNE2Q8WUY3 3088 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 NMT2O60551 498 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 ASGR1P07306 291 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 C6orf222P0C671 652 aaPredicted RBP19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 MCCP23508 829 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 STAT2P52630 851 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 FPGSQ05932 587 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 STAG1Q8WVM7 1258 aa19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 COL25A1Q9BXS0 654 aaPredicted RBP19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 A1CFQ9NQ94 594 aaKnown RBP19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 SPTBN5Q9NRC6 3674 aaKnown RBP19.96■□□□□ 0.79
HDGFL3-203ENST00000563404 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 SOWAHBA6NEL2 793 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 DCDC2CA8MYV0 355 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 MX1P20591 662 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 SLC1A4P43007 532 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 SNAP25P60880 206 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 MYLIPQ8WY64 445 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 ACAD9Q9H845 621 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 RNF146Q9NTX7 359 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 ISY1Q9ULR0 285 aaKnown RBP19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 ASTN1O14525 1302 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 ELP1O95163 1332 aa19.95■□□□□ 0.78
HDGFL3-203ENST00000563404 TIMP1P01033 207 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 SLC3A2P08195 630 aaKnown RBP19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 FDX1P10109 184 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 PTGS1P23219 599 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 VPS53Q5VIR6 699 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 KCTD1Q719H9 257 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 FAM160B2Q86V87 743 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 CHURC1Q8WUH1 139 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 GLT1D1Q96MS3 346 aa19.94■□□□□ 0.78
HDGFL3-203ENST00000563404 PLA2G6O60733 806 aa19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 NKX3-2P78367 333 aa19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 GNASQ5JWF2 1037 aa19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 C16orf59Q7L2K0 433 aa19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 PCSK9Q8NBP7 692 aaKnown RBP19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 TRERF1Q96PN7 1200 aa19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 STX8Q9UNK0 236 aa19.93■□□□□ 0.78
HDGFL3-203ENST00000563404 TSPY2A6NKD2 308 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 ARVCFO00192 962 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 ALAS1P13196 640 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 NOVP48745 357 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 BEX3Q00994 111 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 IKQ13123 557 aaPredicted RBP19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 MUM1L1Q5H9M0 696 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 RCSD1Q6JBY9 416 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 CCDC174Q6PII3 467 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 MAFAQ8NHW3 353 aaPredicted RBP19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 SPC25Q9HBM1 224 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 PRR12Q9ULL5 1215 aa19.92■□□□□ 0.78
HDGFL3-203ENST00000563404 A0A0U1RQG5 324 aaPredicted RBP19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 TKFCQ3LXA3 575 aa19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 MFSD5Q6N075 450 aa19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 FAM126BQ8IXS8 530 aa19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 VTI1AQ96AJ9 217 aa19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 GNEQ9Y223 722 aaKnown RBP19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 MROH7Q68CQ1 1323 aa19.91■□□□□ 0.78
HDGFL3-203ENST00000563404 LRRC37A2A6NM11 1700 aa19.9■□□□□ 0.78
HDGFL3-203ENST00000563404 TNFAIP2Q03169 654 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms