RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 LBX2Q6XYB7 198 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 VTI1AQ96AJ9 217 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 FEZ1Q99689 392 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.463e-7■■■■■ 28.4
SNX29-202ENST00000563308 CABP5Q9NP86 173 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 ECHDC1Q9NTX5 307 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 PRKAG3Q9UGI9 489 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 RABGAP1Q9Y3P9 1069 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 EPG5Q9HCE0 2579 aa12.16□□□□□ -0.46
SNX29-202ENST00000563308 GRXCR2A6NFK2 248 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 AKR1B1P15121 316 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 TSHZ3Q63HK5 1081 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 BMP8AQ7Z5Y6 402 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
SNX29-202ENST00000563308 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.15□□□□□ -0.46
SNX29-202ENST00000563308 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
SNX29-202ENST00000563308 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 BTBD7Q9P203 1132 aa12.15□□□□□ -0.46
SNX29-202ENST00000563308 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
SNX29-202ENST00000563308 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 USP17L21D6R901 530 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 GRB10Q13322 594 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 ST3GAL2Q16842 350 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 ASCL5Q7RTU5 278 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 CLEC10AQ8IUN9 316 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 NPLOC4Q8TAT6 608 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 STRBPQ96SI9 672 aaKnown RBP12.14□□□□□ -0.47
SNX29-202ENST00000563308 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 CHD9Q3L8U1 2897 aa12.14□□□□□ -0.47
SNX29-202ENST00000563308 PRR23AA6NEV1 266 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 MPHOSPH10O00566 681 aaKnown RBP12.13□□□□□ -0.47
SNX29-202ENST00000563308 CDK8P49336 464 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 TMEM179Q6ZVK1 233 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 C16orf86Q6ZW13 317 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 OSBP2Q969R2 916 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 GLT1D1Q96MS3 346 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
SNX29-202ENST00000563308 TSEN34Q9BSV6 310 aaKnown RBP12.13□□□□□ -0.47
SNX29-202ENST00000563308 SLC4A4Q9Y6R1 1079 aa12.13□□□□□ -0.47
SNX29-202ENST00000563308 ATRXP46100 2492 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.12□□□□□ -0.47
SNX29-202ENST00000563308 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 GSG1L2A8MUP6 293 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 M0R296 226 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 KDM4AO75164 1064 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 PGK1P00558 417 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 IGHA2P01877 340 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 GRB14Q14449 540 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 FBXL6Q8N531 539 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
SNX29-202ENST00000563308 EDAQ92838 391 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNX29-202ENST00000563308 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
SNX29-202ENST00000563308 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
SNX29-202ENST00000563308 KMT2BQ9UMN6 2715 aaPredicted RBP12.11□□□□□ -0.47
SNX29-202ENST00000563308 MOXD2PA6NHM9 499 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 H0Y858 1186 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 RNF113AO15541 343 aaKnown RBP12.11□□□□□ -0.47
SNX29-202ENST00000563308 CYP2C18P33260 490 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 ACLYP53396 1101 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 RRP1P56182 461 aaKnown RBP12.11□□□□□ -0.47
SNX29-202ENST00000563308 ICA1Q05084 483 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 COG2Q14746 738 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 EP400NLQ6ZTU2 488 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 REV3LO60673 3130 aa12.11□□□□□ -0.47
SNX29-202ENST00000563308 MYH7P12883 1935 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 EPOPA6NHQ4 379 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 M0R2C6 588 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 ZP2Q05996 745 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 HERC4Q5GLZ8 1057 aaPredicted RBP12.1□□□□□ -0.47
SNX29-202ENST00000563308 PRAMEF19Q5SWL8 479 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 GIMAP6Q6P9H5 292 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 ADHFE1Q8IWW8 467 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 SPICE1Q8N0Z3 855 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 APPBP2Q92624 585 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 NKD2Q969F2 451 aaPredicted RBP12.1□□□□□ -0.47
SNX29-202ENST00000563308 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
SNX29-202ENST00000563308 VCPKMTQ9H867 229 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
SNX29-202ENST00000563308 HOXC10Q9NYD6 342 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
SNX29-202ENST00000563308 SALL3Q9BXA9 1300 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms