RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-205	ENST00000563293	MCM3AP	O60318	1980 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293		A0A0D9SFI3	127 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	MAGEB6P1	A0A0J9YX57	407 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	DCDC2C	A8MYV0	355 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	SNAI1	O95863	264 aa	Predicted RBP	11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	BMP1	P13497	986 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	IGFBP4	P22692	258 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	CDK7	P50613	346 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	MRPS5	P82675	430 aa	Known RBP	11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	RNF20	Q5VTR2	975 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	GIMAP6	Q6P9H5	292 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	MB21D1	Q8N884	522 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	SDR42E1	Q8WUS8	393 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	OSBP2	Q969R2	916 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	GAS2L1	Q99501	681 aa	Predicted RBP	11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	USP26	Q9BXU7	913 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	NACAP1	Q9BZK3	213 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	NKX2-4	Q9H2Z4	354 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	ANO2	Q9NQ90	1003 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	MCM9	Q9NXL9	1143 aa		11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293		U3KPZ7	1027 aa	Predicted RBP	11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.16	□□□□□ -0.62
RPAP1-205	ENST00000563293	CYP2D7	A0A087X1C5	515 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	PATL2	C9JE40	543 aa	Known RBP	11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	GPAA1	O43292	621 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	AKR1A1	P14550	325 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	MYOG	P15173	224 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	CYP2C18	P33260	490 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	RABGGTB	P53611	331 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	ALX1	Q15699	326 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	REPS2	Q8NFH8	660 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	MAP4K1	Q92918	833 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	DDRGK1	Q96HY6	314 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	STRBP	Q96SI9	672 aa	Known RBP	11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	TSEN34	Q9BSV6	310 aa	Known RBP	11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	PPP1R12C	Q9BZL4	782 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	PUS7L	Q9H0K6	701 aa	Known RBP	11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	NRBP1	Q9UHY1	535 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	TMX2	Q9Y320	296 aa		11.15	□□□□□ -0.62
RPAP1-205	ENST00000563293	UMODL1	Q5DID0	1318 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	MYH8	P13535	1937 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	VWA5A	O00534	786 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	PRKAB2	O43741	272 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	PTGS1	P23219	599 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	HOXD11	P31277	338 aa	Predicted RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	RBM25	P49756	843 aa	Known RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	KCNQ1	P51787	676 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	ANAPC15	P60006	121 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	TMEM179	Q6ZVK1	233 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	RIOX2	Q8IUF8	465 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	LCORL	Q8N3X6	602 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	VWCE	Q96DN2	955 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	C22orf23	Q9BZE7	217 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	LSG1	Q9H089	658 aa	Known RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	EPHX3	Q9H6B9	360 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	VCPKMT	Q9H867	229 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	ATP8A2	Q9NTI2	1148 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	ZNF214	Q9UL59	606 aa	Predicted RBP	11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	RIPK3	Q9Y572	518 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	ROBO3	Q96MS0	1386 aa		11.14	□□□□□ -0.63
RPAP1-205	ENST00000563293	ZMYM6	O95789	1325 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293		M0R2C6	588 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	RFXAP	O00287	272 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	CTAGE5	O15320	804 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	MBD4	O95243	580 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	SEC24B	O95487	1268 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	SLC25A27	O95847	323 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	CHGB	P05060	677 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	ASGR1	P07306	291 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	HSPD1	P10809	573 aa	Known RBP	11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	STAT3	P40763	770 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	NT5C2	P49902	561 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	ICA1	Q05084	483 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	PPIG	Q13427	754 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	2e-6	■■■□□ 15.8
RPAP1-205	ENST00000563293	KCTD2	Q14681	263 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	FAM126B	Q8IXS8	530 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	NUP133	Q8WUM0	1156 aa		11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	DIS3	Q9Y2L1	958 aa	Known RBP	11.13	□□□□□ -0.63
RPAP1-205	ENST00000563293	MOXD2P	A6NHM9	499 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	RBAK-RBAKDN	I3L0D1	243 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	WDR46	O15213	610 aa	Known RBP	11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	EEF2	P13639	858 aa	Known RBP	11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	HSPA4	P34932	840 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	KRT32	Q14532	448 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	TSGA10IP	Q3SY00	556 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	FAM83B	Q5T0W9	1011 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	OTOP2	Q7RTS6	562 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	MICALL1	Q8N3F8	863 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	HERVK_113	Q902F9	699 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	KCNB2	Q92953	911 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	IL17RA	Q96F46	866 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	FGD4	Q96M96	766 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	TBC1D32	Q96NH3	1257 aa		11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	SEC62	Q99442	399 aa	Known RBP	11.12	□□□□□ -0.63
RPAP1-205	ENST00000563293	NUP88	Q99567	741 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms