RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 LRRC8AQ8IWT6 810 aa21.69■■□□□ 1.06
SMPD3-203ENST00000563226 REXO1Q8N1G1 1221 aaKnown RBP21.69■■□□□ 1.06
SMPD3-203ENST00000563226 IQUBQ8NA54 791 aa21.69■■□□□ 1.06
SMPD3-203ENST00000563226 RAD17O75943 681 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 GDF11O95390 407 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 SF3B2Q13435 895 aaKnown RBP21.68■■□□□ 1.06
SMPD3-203ENST00000563226 SEPT2Q15019 361 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 HSP90AA4PQ58FG1 418 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 TBCKQ8TEA7 893 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 BLZF1Q9H2G9 400 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 R3HCC1Q9Y3T6 440 aaKnown RBP21.68■■□□□ 1.06
SMPD3-203ENST00000563226 ARFGEF1Q9Y6D6 1849 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 hCG_1984214I3L0E3 225 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 CCNT1O60563 726 aaKnown RBP21.68■■□□□ 1.06
SMPD3-203ENST00000563226 SIAH1Q8IUQ4 282 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 ZNF713Q8N859 430 aaPredicted RBP21.68■■□□□ 1.06
SMPD3-203ENST00000563226 CCDC34Q96HJ3 373 aa21.68■■□□□ 1.06
SMPD3-203ENST00000563226 ATRNL1Q5VV63 1379 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 USP17L10C9JJH3 530 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 CD44P16070 742 aaKnown RBP21.67■■□□□ 1.06
SMPD3-203ENST00000563226 JAG1P78504 1218 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 NEK8Q86SG6 692 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 TRIM34Q9BYJ4 488 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 PNMA6FA0A0J9YX94 578 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 PSMD14O00487 310 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 RAD21O60216 631 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 GPATCH4Q5T3I0 446 aaKnown RBP21.67■■□□□ 1.06
SMPD3-203ENST00000563226 RSBN1LQ6PCB5 846 aaPredicted RBP21.67■■□□□ 1.06
SMPD3-203ENST00000563226 TMC6Q7Z403 805 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 SMYD4Q8IYR2 804 aaPredicted RBP21.67■■□□□ 1.06
SMPD3-203ENST00000563226 PSMD1Q99460 953 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 DACH1Q9UI36 760 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 KIF13BQ9NQT8 1826 aa21.67■■□□□ 1.06
SMPD3-203ENST00000563226 ADCY7P51828 1080 aa21.66■■□□□ 1.06
SMPD3-203ENST00000563226 CUL4BQ13620 913 aa21.66■■□□□ 1.06
SMPD3-203ENST00000563226 RRP1BQ14684 758 aaKnown RBP21.66■■□□□ 1.06
SMPD3-203ENST00000563226 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
SMPD3-203ENST00000563226 LARGE2Q8N3Y3 721 aa21.66■■□□□ 1.06
SMPD3-203ENST00000563226 NFE2L3Q9Y4A8 694 aa21.66■■□□□ 1.06
SMPD3-203ENST00000563226 EDIL3O43854 480 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 ENTPD3O75355 529 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 NAALADL2Q58DX5 795 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 ENOX1Q8TC92 643 aaKnown RBP21.65■■□□□ 1.06
SMPD3-203ENST00000563226 LRRC15Q8TF66 581 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 MKL1Q969V6 931 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 GSDMAQ96QA5 445 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 KANSL2Q9H9L4 492 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 DISC1Q9NRI5 854 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 NYAP2Q9P242 653 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 ZBTB12Q9Y330 459 aaPredicted RBP21.65■■□□□ 1.06
SMPD3-203ENST00000563226 LAD1O00515 517 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 NEMFO60524 1076 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 SERPINC1P01008 464 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 OR52Z1P0C646 297 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 TXLNAP40222 546 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 PRPHP41219 470 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 UBASH3AP57075 661 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 MTMR8Q96EF0 704 aa21.65■■□□□ 1.06
SMPD3-203ENST00000563226 CLRN2A0PK11 232 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 STAT6P42226 847 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 CCZ1BP86790 482 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 CCZ1P86791 482 aaPredicted RBP21.64■■□□□ 1.05
SMPD3-203ENST00000563226 ICA1Q05084 483 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 UBE2SQ16763 222 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 PTPN21Q16825 1174 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 SLFN13Q68D06 897 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 GMLQ99445 158 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 PLIN2Q99541 437 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 PYM1Q9BRP8 204 aaKnown RBP21.64■■□□□ 1.05
SMPD3-203ENST00000563226 SPDYE2BA6NHP3 402 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 TCP10L2B9ZVM9 353 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 TMEM232C9JQI7 657 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 VIL1P09327 827 aaKnown RBP21.64■■□□□ 1.05
SMPD3-203ENST00000563226 SPDYE6P0CI01 402 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 ZNF18P17022 549 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 ABCB5Q2M3G0 1257 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 PPP4R3BQ5MIZ7 849 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 KLHL10Q6JEL2 608 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 TMEM179Q6ZVK1 233 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 CSRNP1Q96S65 589 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 INTS13Q9NVM9 706 aa21.64■■□□□ 1.05
SMPD3-203ENST00000563226 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.64■■□□□ 1.05
SMPD3-203ENST00000563226 ZBTB5O15062 677 aa21.63■■□□□ 1.05
SMPD3-203ENST00000563226 GTPBP6O43824 516 aaPredicted RBP21.63■■□□□ 1.05
SMPD3-203ENST00000563226 DNTTIP2Q5QJE6 756 aaKnown RBP21.63■■□□□ 1.05
SMPD3-203ENST00000563226 SAMSN1Q9NSI8 373 aaKnown RBP21.63■■□□□ 1.05
SMPD3-203ENST00000563226 IMPACTQ9P2X3 320 aa21.63■■□□□ 1.05
SMPD3-203ENST00000563226 COL2A1P02458 1487 aaPredicted RBP21.63■■□□□ 1.05
SMPD3-203ENST00000563226 MYH7BA7E2Y1 1941 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 ERCC5P28715 1186 aaPredicted RBP21.62■■□□□ 1.05
SMPD3-203ENST00000563226 SLC1A4P43007 532 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 GRIPAP1Q4V328 841 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 PPP1R18Q6NYC8 613 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 ARMCX5Q6P1M9 558 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 DCAF4Q8WV16 495 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 CCSER1Q9C0I3 900 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 RIC8AQ9NPQ8 531 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 PPP1R3GB7ZBB8 358 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 GH2P01242 217 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms