RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CYP2D6P10635 497 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 VEGFAP15692 232 aaPredicted RBP14.7□□□□□ -0.06
USB1-207ENST00000563149 MCM3P25205 808 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 PRDX5P30044 214 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 BARGINQ6ZT62 677 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 FAM114A1Q8IWE2 563 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 EHBP1Q8NDI1 1231 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 SLF1Q9BQI6 1058 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 BARHL2Q9NY43 387 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 MAD2L2Q9UI95 211 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 TAF1P21675 1872 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 TTC26A0AVF1 554 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 ERICH4A6NGS2 130 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 CDC25AP30304 524 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 HOXA7P31268 230 aaPredicted RBP14.69□□□□□ -0.06
USB1-207ENST00000563149 GSTO1P78417 241 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 ORC2Q13416 577 aaPredicted RBP14.69□□□□□ -0.06
USB1-207ENST00000563149 MEA1Q16626 185 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 COBLL1Q53SF7 1204 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 WDR93Q6P2C0 686 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 DZIP1Q86YF9 867 aaKnown RBP14.69□□□□□ -0.06
USB1-207ENST00000563149 CERS3Q8IU89 383 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 RPGRIP1Q96KN7 1286 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 ZSWIM4Q9H7M6 989 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 IL17RBQ9NRM6 502 aa14.69□□□□□ -0.06
USB1-207ENST00000563149 ADAMTS3O15072 1205 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 COBLO75128 1261 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 SRGNP10124 158 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 CYLC1P35663 651 aaPredicted RBP14.68□□□□□ -0.06
USB1-207ENST00000563149 EVX2Q03828 476 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 MUM1L1Q5H9M0 696 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 TTI2Q6NXR4 508 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 CCDC170Q8IYT3 715 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 RASSF8Q8NHQ8 419 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 WDR66Q8TBY9 1149 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 TRIM47Q96LD4 638 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 CHP1Q99653 195 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 ACBD3Q9H3P7 528 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 PALM3A6NDB9 673 aaPredicted RBP14.68□□□□□ -0.06
USB1-207ENST00000563149 STXBP3O00186 592 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 BAG3O95817 575 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 USP17L8P0C7I0 530 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 CCNE1P24864 410 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 KLRK1P26718 216 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 PPP4CP60510 307 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 FIGNQ5HY92 759 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 RC3H1Q5TC82 1133 aaKnown RBP14.68□□□□□ -0.06
USB1-207ENST00000563149 TBC1D9BQ66K14 1250 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 TRAPPC11Q7Z392 1133 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 KRT25Q7Z3Z0 450 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 ZNF444Q8N0Y2 327 aaPredicted RBP14.68□□□□□ -0.06
USB1-207ENST00000563149 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 LINC00116Q8NCU8 138 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 GPKOWQ92917 476 aaPredicted RBP eCLIP14.68□□□□□ -0.06
USB1-207ENST00000563149 PNKPQ96T60 521 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 MKNK2Q9HBH9 465 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 ZNF287Q9HBT7 754 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 EXOC1Q9NV70 894 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 TFCP2L1Q9NZI6 479 aa14.68□□□□□ -0.06
USB1-207ENST00000563149 REXO2Q9Y3B8 237 aaKnown RBP14.68□□□□□ -0.06
USB1-207ENST00000563149 COL24A1Q17RW2 1714 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 SPATA31A5Q5VU36 1347 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 SPATA31A7Q8IWB4 1347 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 IRS2Q9Y4H2 1338 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 KRT86O43790 486 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 LDHCP07864 332 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 SMARCA1P28370 1054 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 CDK17Q00537 523 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 AMPD3Q01432 767 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 PAPD7Q5XG87 772 aaKnown RBP14.67□□□□□ -0.06
USB1-207ENST00000563149 C7orf25Q9BPX7 421 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 SPZ1Q9BXG8 430 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 TMEM60Q9H2L4 133 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 ABCB6Q9NP58 842 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 ZNHIT6Q9NWK9 470 aaKnown RBP14.67□□□□□ -0.06
USB1-207ENST00000563149 NARFQ9UHQ1 456 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 MAPK8IP1Q9UQF2 711 aa14.67□□□□□ -0.06
USB1-207ENST00000563149 A0A1W2PQJ5 194 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 TRIM49BA6NDI0 452 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 LDHBP07195 334 aaKnown RBP14.66□□□□□ -0.06
USB1-207ENST00000563149 TSPY3P0CV98 308 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 TSPY8P0CW00 308 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 CKAP4Q07065 602 aaKnown RBP14.66□□□□□ -0.06
USB1-207ENST00000563149 INF2Q27J81 1249 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 TYW1BQ6NUM6 668 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 CABP7Q86V35 215 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 P2RX5Q93086 422 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 TTYH3Q9C0H2 523 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 ZMYND12Q9H0C1 365 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 ZCCHC17Q9NP64 241 aaKnown RBP14.66□□□□□ -0.06
USB1-207ENST00000563149 ADAM21Q9UKJ8 722 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 GUCA1BQ9UMX6 200 aa14.66□□□□□ -0.06
USB1-207ENST00000563149 EIF3CLB5ME19 914 aaKnown RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 ABL1P00519 1130 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 GNA11P29992 359 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 HNRNPH2P55795 449 aaKnown RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 ZBED6P86452 979 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms