RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 TMEM39AQ9NV64 488 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 TMEM232C9JQI7 657 aa25.18■■□□□ 1.62
GGA2-204ENST00000563047 RAG1P15918 1043 aa25.18■■□□□ 1.62
GGA2-204ENST00000563047 CDX2Q99626 313 aaPredicted RBP25.18■■□□□ 1.62
GGA2-204ENST00000563047 ABHD16BQ9H3Z7 469 aa25.18■■□□□ 1.62
GGA2-204ENST00000563047 CUL9Q8IWT3 2517 aa25.18■■□□□ 1.62
GGA2-204ENST00000563047 FOXP2O15409 715 aa25.17■■□□□ 1.62
GGA2-204ENST00000563047 CST5P28325 142 aaPredicted RBP25.17■■□□□ 1.62
GGA2-204ENST00000563047 CCDC144BQ3MJ40 725 aa25.17■■□□□ 1.62
GGA2-204ENST00000563047 ARMCX2Q7L311 632 aa25.17■■□□□ 1.62
GGA2-204ENST00000563047 TTYH1Q9H313 450 aaPredicted RBP25.17■■□□□ 1.62
GGA2-204ENST00000563047 HOMER2Q9NSB8 354 aa25.17■■□□□ 1.62
GGA2-204ENST00000563047 SLC3A2P08195 630 aaKnown RBP25.16■■□□□ 1.62
GGA2-204ENST00000563047 FDX1P10109 184 aa25.16■■□□□ 1.62
GGA2-204ENST00000563047 STAT2P52630 851 aa25.16■■□□□ 1.62
GGA2-204ENST00000563047 CNTN2Q02246 1040 aa25.16■■□□□ 1.62
GGA2-204ENST00000563047 CHMP4CQ96CF2 233 aa25.16■■□□□ 1.62
GGA2-204ENST00000563047 GMCL1Q96IK5 515 aa25.16■■□□□ 1.62
GGA2-204ENST00000563047 KATNBL1Q9H079 304 aa25.16■■□□□ 1.62
GGA2-204ENST00000563047 UPF3AQ9H1J1 476 aaKnown RBP25.16■■□□□ 1.62
GGA2-204ENST00000563047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.16■■□□□ 1.621e-6■□□□□ 10.4
GGA2-204ENST00000563047 ZNF536O15090 1300 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 DCDC2CA8MYV0 355 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 C6orf222P0C671 652 aaPredicted RBP25.15■■□□□ 1.62
GGA2-204ENST00000563047 MX1P20591 662 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 FPGSQ05932 587 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 CCDC129Q6ZRS4 1044 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.15■■□□□ 1.62
GGA2-204ENST00000563047 CCDC144CPQ8IYA2 1237 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 STAG1Q8WVM7 1258 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 RNPC3Q96LT9 517 aaKnown RBP25.15■■□□□ 1.62
GGA2-204ENST00000563047 AGBL1Q96MI9 1066 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 INCENPQ9NQS7 918 aa25.15■■□□□ 1.62
GGA2-204ENST00000563047 ISY1Q9ULR0 285 aaKnown RBP25.15■■□□□ 1.62
GGA2-204ENST00000563047 ELP1O95163 1332 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 SALL3Q9BXA9 1300 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 ASGR1P07306 291 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 MCCP23508 829 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 SLC1A4P43007 532 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 GJA9P57773 515 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 CTDSPL2Q05D32 466 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 FAM160B2Q86V87 743 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 FAM133AQ8N9E0 248 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 CHURC1Q8WUH1 139 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 GLT1D1Q96MS3 346 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 ACAD9Q9H845 621 aa25.14■■□□□ 1.62
GGA2-204ENST00000563047 EYSQ5T1H1 3165 aa25.14■■□□□ 1.61
GGA2-204ENST00000563047 CDK7P50613 346 aa25.13■■□□□ 1.61
GGA2-204ENST00000563047 PCSK9Q8NBP7 692 aaKnown RBP25.13■■□□□ 1.61
GGA2-204ENST00000563047 A1CFQ9NQ94 594 aaKnown RBP25.13■■□□□ 1.61
GGA2-204ENST00000563047 IL17RBQ9NRM6 502 aa25.13■■□□□ 1.61
GGA2-204ENST00000563047 RNF146Q9NTX7 359 aa25.13■■□□□ 1.61
GGA2-204ENST00000563047 TBX21Q9UL17 535 aa25.13■■□□□ 1.61
GGA2-204ENST00000563047 CTAGE5O15320 804 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 NMT2O60551 498 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 PLA2G6O60733 806 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 TIMP1P01033 207 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 IKQ13123 557 aaPredicted RBP25.12■■□□□ 1.61
GGA2-204ENST00000563047 RASGRP2Q7LDG7 609 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 SPC25Q9HBM1 224 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 STX8Q9UNK0 236 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 CDH23Q9H251 3354 aa25.12■■□□□ 1.61
GGA2-204ENST00000563047 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.11■■□□□ 1.61
GGA2-204ENST00000563047 SOWAHBA6NEL2 793 aa25.11■■□□□ 1.61
GGA2-204ENST00000563047 TSPY2A6NKD2 308 aa25.11■■□□□ 1.61
GGA2-204ENST00000563047 GNASQ5JWF2 1037 aa25.11■■□□□ 1.61
GGA2-204ENST00000563047 KCTD1Q719H9 257 aa25.11■■□□□ 1.61
GGA2-204ENST00000563047 MYLIPQ8WY64 445 aa25.11■■□□□ 1.61
GGA2-204ENST00000563047 COL25A1Q9BXS0 654 aaPredicted RBP25.11■■□□□ 1.61
GGA2-204ENST00000563047 MROH7Q68CQ1 1323 aa25.11■■□□□ 1.61
GGA2-204ENST00000563047 SNAP25P60880 206 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 NKX3-2P78367 333 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 TKFCQ3LXA3 575 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 PPP4R3BQ5MIZ7 849 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 VPS53Q5VIR6 699 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 RCSD1Q6JBY9 416 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 VTI1AQ96AJ9 217 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 TRERF1Q96PN7 1200 aa25.1■■□□□ 1.61
GGA2-204ENST00000563047 A0A0U1RQG5 324 aaPredicted RBP25.09■■□□□ 1.61
GGA2-204ENST00000563047 ARVCFO00192 962 aa25.09■■□□□ 1.61
GGA2-204ENST00000563047 ALAS1P13196 640 aa25.09■■□□□ 1.61
GGA2-204ENST00000563047 CCDC174Q6PII3 467 aa25.09■■□□□ 1.61
GGA2-204ENST00000563047 MAFAQ8NHW3 353 aaPredicted RBP25.09■■□□□ 1.61
GGA2-204ENST00000563047 ANAPC4Q9UJX5 808 aa25.09■■□□□ 1.61
GGA2-204ENST00000563047 PRR12Q9ULL5 1215 aa25.09■■□□□ 1.61
GGA2-204ENST00000563047 ASTN1O14525 1302 aa25.09■■□□□ 1.61
GGA2-204ENST00000563047 NOVP48745 357 aa25.08■■□□□ 1.61
GGA2-204ENST00000563047 BEX3Q00994 111 aa25.08■■□□□ 1.61
GGA2-204ENST00000563047 MUM1L1Q5H9M0 696 aa25.08■■□□□ 1.61
GGA2-204ENST00000563047 MFSD5Q6N075 450 aa25.08■■□□□ 1.61
GGA2-204ENST00000563047 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.08■■□□□ 1.612e-14■■□□□ 12.1
GGA2-204ENST00000563047 DDX49Q9Y6V7 483 aaKnown RBP25.08■■□□□ 1.61
GGA2-204ENST00000563047 TMEM265A0A087WTH1 108 aa25.07■■□□□ 1.6
GGA2-204ENST00000563047 ASB14A6NK59 587 aa25.07■■□□□ 1.6
GGA2-204ENST00000563047 TNFAIP2Q03169 654 aa25.07■■□□□ 1.6
GGA2-204ENST00000563047 FAM126BQ8IXS8 530 aa25.07■■□□□ 1.6
GGA2-204ENST00000563047 GNEQ9Y223 722 aaKnown RBP25.07■■□□□ 1.6
GGA2-204ENST00000563047 LRRC37A2A6NM11 1700 aa25.06■■□□□ 1.6
GGA2-204ENST00000563047 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.06■■□□□ 1.6
GGA2-204ENST00000563047 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms