RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 HPS1Q92902 700 aa9.16□□□□□ -0.94
AP003071.2-201ENST00000562772 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
AP003071.2-201ENST00000562772 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
AP003071.2-201ENST00000562772 CPA4Q9UI42 421 aa9.16□□□□□ -0.94
AP003071.2-201ENST00000562772 ZBTB21Q9ULJ3 1066 aa9.16□□□□□ -0.94
AP003071.2-201ENST00000562772 ZSWIM8A7E2V4 1837 aa9.16□□□□□ -0.94
AP003071.2-201ENST00000562772 ANKRD62A6NC57 917 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 CYP2C8P10632 490 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 PSMC4P43686 418 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 SOX10P56693 466 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 GABPAQ06546 454 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 SF3A1Q15459 793 aaKnown RBP9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 ZNF333Q96JL9 665 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 ATP8A2Q9NTI2 1148 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 SRRDQ9UH36 339 aa9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 SAP30BPQ9UHR5 308 aaKnown RBP9.15□□□□□ -0.94
AP003071.2-201ENST00000562772 TTC41PQ6P2S7 1318 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 DGAT1O75907 488 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 ADH1CP00326 375 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 ZNF16P17020 682 aaPredicted RBP9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 CTGFP29279 349 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 PLCD1P51178 756 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 HMGCS2P54868 508 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 FCGRTP55899 365 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 JAG1P78504 1218 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 FAM110CQ1W6H9 321 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 PKDCCQ504Y2 493 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 TREML2Q5T2D2 321 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 Q6ZNB5 142 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 VASH1Q7L8A9 365 aaPredicted RBP9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 CCDC84Q86UT8 332 aaPredicted RBP9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 SMCR8Q8TEV9 937 aaPredicted RBP9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 ARHGAP39Q9C0H5 1083 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 DCP1AQ9NPI6 582 aaPredicted RBP9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 MAP4K5Q9Y4K4 846 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 PTCH2Q9Y6C5 1203 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 WASF2Q9Y6W5 498 aa9.14□□□□□ -0.95
AP003071.2-201ENST00000562772 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 ZFYP08048 801 aaPredicted RBP9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 NR3C2P08235 984 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 CAPN2P17655 700 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 RFX1P22670 979 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 SHMT1P34896 483 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 USP14P54578 494 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 CERKLQ49MI3 558 aaPredicted RBP9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 SLC9C1Q4G0N8 1177 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 KBTBD3Q8NAB2 608 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 EDC3Q96F86 508 aaKnown RBP9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 C12orf42Q96LP6 360 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 MCM9Q9NXL9 1143 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 TMOD4Q9NZQ9 345 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 MORF4L1Q9UBU8 362 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 SWAP70Q9UH65 585 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 CEP290O15078 2479 aa9.13□□□□□ -0.95
AP003071.2-201ENST00000562772 ERC2O15083 957 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 GDF11O95390 407 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 AVPP01185 164 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 GH2P01242 217 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 NNTQ13423 1086 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 ABCB5Q2M3G0 1257 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 LRRFIP1Q32MZ4 808 aaKnown RBP9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 DNAJC14Q6Y2X3 702 aaPredicted RBP9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 KIAA1683Q9H0B3 1180 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 ASCC2Q9H1I8 757 aaPredicted RBP9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 ARMT1Q9H993 441 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
AP003071.2-201ENST00000562772 MYPNQ86TC9 1320 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 HTTP42858 3142 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 GLRX3O76003 335 aaKnown RBP9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 MBD4O95243 580 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 VAMP1P23763 118 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 FSHRP23945 695 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 GRK4P32298 578 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 GUCY1A2P33402 732 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 C12orf60Q5U649 245 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 NOL8Q76FK4 1167 aaKnown RBP9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 SDR42E1Q8WUS8 393 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 COA7Q96BR5 231 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 CCDC17Q96LX7 622 aa9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 KCTD15Q96SI1 283 aaPredicted RBP9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 STRBPQ96SI9 672 aaKnown RBP9.11□□□□□ -0.95
AP003071.2-201ENST00000562772 SALL3Q9BXA9 1300 aa9.1□□□□□ -0.95
AP003071.2-201ENST00000562772 RLFQ13129 1914 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms