RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MSCO60682 206 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 COBLO75128 1261 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 FDX1P10109 184 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 ERCC3P19447 782 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 STAT2P52630 851 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 PLS1Q14651 629 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 OLFML2BQ68BL8 750 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 REPS2Q8NFH8 660 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 CHURC1Q8WUH1 139 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 ZSCAN10Q96SZ4 725 aaPredicted RBP19.45■□□□□ 0.7
CDT1-202ENST00000562747 ZKSCAN3Q9BRR0 538 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 ANO2Q9NQ90 1003 aa19.45■□□□□ 0.7
CDT1-202ENST00000562747 LAMA2P24043 3122 aaKnown RBP19.44■□□□□ 0.7
CDT1-202ENST00000562747 TMEM232C9JQI7 657 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 POTEB2H3BUK9 544 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 SLC25A27O95847 323 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 COPB2P35606 906 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 RIOX2Q8IUF8 465 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 ANKS1AQ92625 1134 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 KIFC2Q96AC6 838 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 MROH8Q9H579 483 aa19.44■□□□□ 0.7
CDT1-202ENST00000562747 ZNF214Q9UL59 606 aaPredicted RBP19.44■□□□□ 0.7
CDT1-202ENST00000562747 ISY1Q9ULR0 285 aaKnown RBP19.44■□□□□ 0.7
CDT1-202ENST00000562747 E7EWF7 191 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 ATP2A1O14983 1001 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 STRNO43815 780 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 ZBED4O75132 1171 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 STAT3P40763 770 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 DPP9Q86TI2 863 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 NCOA7Q8NI08 942 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 FAM161BQ96MY7 647 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 LBHD1Q9BQE6 289 aaPredicted RBP19.43■□□□□ 0.7
CDT1-202ENST00000562747 UBAC1Q9BSL1 405 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 ATP11BQ9Y2G3 1177 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
CDT1-202ENST00000562747 TNKSO95271 1327 aa19.43■□□□□ 0.7
CDT1-202ENST00000562747 OAZ1P54368 228 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 IKQ13123 557 aaPredicted RBP19.42■□□□□ 0.7
CDT1-202ENST00000562747 NECTIN1Q15223 517 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 CCDC96Q2M329 555 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 PRAMEF19Q5SWL8 479 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 KCTD1Q719H9 257 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 RALYLQ86SE5 291 aaKnown RBP19.42■□□□□ 0.7
CDT1-202ENST00000562747 NCAPG2Q86XI2 1143 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 ENAHQ8N8S7 591 aaPredicted RBP19.42■□□□□ 0.7
CDT1-202ENST00000562747 TEX13BQ9BXU2 312 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 SLC38A10Q9HBR0 1119 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 MTMR7Q9Y216 660 aa19.42■□□□□ 0.7
CDT1-202ENST00000562747 ZNFX1Q9P2E3 1918 aaKnown RBP19.42■□□□□ 0.7
CDT1-202ENST00000562747 PLXNA1Q9UIW2 1896 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 SEPT4O43236 478 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 SNHG28P0DPA3 235 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 PDHBP11177 359 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 FAM109BQ6ICB4 259 aaPredicted RBP19.41■□□□□ 0.7
CDT1-202ENST00000562747 SLC39A5Q6ZMH5 540 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 RASGRP2Q7LDG7 609 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 ABRAQ8N0Z2 381 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 KAT14Q9H8E8 782 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
CDT1-202ENST00000562747 SLC27A2O14975 620 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 TRIM60Q495X7 471 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 C9orf50Q5SZB4 431 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 CREB3L3Q68CJ9 461 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 BTNL9Q6UXG8 535 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 STOX1Q6ZVD7 989 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 PNMA1Q8ND90 353 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 CHMP4CQ96CF2 233 aa19.4■□□□□ 0.7
CDT1-202ENST00000562747 KBTBD13C9JR72 458 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 MYCNP04198 464 aaPredicted RBP19.39■□□□□ 0.69
CDT1-202ENST00000562747 ZNF543Q08ER8 600 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 SNX17Q15036 470 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 SEC23AQ15436 765 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 SHHQ15465 462 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 IFIT1BQ5T764 474 aaKnown RBP19.39■□□□□ 0.69
CDT1-202ENST00000562747 RNF20Q5VTR2 975 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 SNRNP48Q6IEG0 339 aaKnown RBP19.39■□□□□ 0.69
CDT1-202ENST00000562747 SH3RF1Q7Z6J0 888 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 ARRDC4Q8NCT1 418 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 MAML3Q96JK9 1138 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 PRDM5Q9NQX1 630 aaPredicted RBP19.39■□□□□ 0.69
CDT1-202ENST00000562747 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 PRKAG2Q9UGJ0 569 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 PRR12Q9ULL5 1215 aa19.39■□□□□ 0.69
CDT1-202ENST00000562747 ERICH2A1L162 156 aa19.38■□□□□ 0.69
CDT1-202ENST00000562747 FCER1AP12319 257 aa19.38■□□□□ 0.69
CDT1-202ENST00000562747 ADCYAP1R1P41586 468 aa19.38■□□□□ 0.69
CDT1-202ENST00000562747 SART3Q15020 963 aaKnown RBP19.38■□□□□ 0.69
CDT1-202ENST00000562747 LRRC41Q15345 812 aa19.38■□□□□ 0.69
CDT1-202ENST00000562747 GPATCH4Q5T3I0 446 aaKnown RBP19.38■□□□□ 0.69
CDT1-202ENST00000562747 FRMPD2Q68DX3 1309 aaPredicted RBP19.38■□□□□ 0.69
CDT1-202ENST00000562747 MB21D2Q8IYB1 491 aaPredicted RBP19.38■□□□□ 0.69
CDT1-202ENST00000562747 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
CDT1-202ENST00000562747 FERMT2Q96AC1 680 aa19.38■□□□□ 0.69
CDT1-202ENST00000562747 COL25A1Q9BXS0 654 aaPredicted RBP19.38■□□□□ 0.69
CDT1-202ENST00000562747 RAVER2Q9HCJ3 691 aaKnown RBP19.38■□□□□ 0.69
CDT1-202ENST00000562747 EYSQ5T1H1 3165 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 IFIT3O14879 490 aaKnown RBP19.37■□□□□ 0.69
CDT1-202ENST00000562747 SYDE2Q5VT97 1194 aa19.37■□□□□ 0.69
CDT1-202ENST00000562747 TTBK2Q6IQ55 1244 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms